| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0580 |
|---|
| Symbol | |
|---|
| ID | 5898035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 632054 |
|---|
| End bp | 633496 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641561062 |
|---|
| Product | succinic semialdehyde dehydrogenase |
|---|
| Protein accession | YP_001682211 |
|---|
| Protein GI | 167644548 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGCTAA GGGATCCGTC CCTCCTCAAA GATCAATGCT TCGTCGGCGG CGCGTGGATT
GGTTTGCCCC AAGTTGATGT CATCGACCCG GCGAGCGGCG AGAAGATCGC GGCGGTGCCA
AATTGTGGGG CGAACGAGAC GCAGCAGGCC ATCCAGGCAG CCGATGCCGC GCTGCCCGGC
TGGCGCGGCC GCACCGCGGC GCAGCGTTCG ACGATCATGC GGCGCTGGTT TGAGGCCACG
ATCGAGGCGA CCGAAGATCT CGCGCTTATC CTGAGCAGCG AGCAGGGCAA ACCGATCGCC
GAGGCGCGCG CTGAAATCAT CTACGCCGCC AGCTTCATCG AATGGTTCGC AGAAGAGGCT
AAGCGAACCT ATGGCGAGGT CATCCCCAGT CCGCGCGCCG ACGCACGGAT CGTCGTGATC
CAGCAGCCGA TCGGCGTGAC GGCCGCGATC ACGCCGTGGA ATTTCCCGGC CGCCATGATC
ACGCGCAAGG CTGGTCCGGC GCTGGCGGCG GGTTGCACGA TGGTGTTGAA ACCGGCGATG
CAGACGCCGT TGACGGCCTT GGCGCTGGCT GCGCTCGCGC AACGCAGCGG CGTCCCTGAT
GGTGTCTTCA ATGTCGTGAC CGGGAGCGCA CGCGACATCG GCGGGGAACT GACCTCGAAC
CCCATCGTGC GCAAGATCAG CTTTACCGGA TCGACCGAGA TCGGCCGCCT GTTGATGCGA
CAGGGCGCTG CGACGGTGAA GAAGATGTCT CTGGAATTGG GAGGAAACGC GCCCTTTATC
GTGTTCGATG ACGCCGATGT CGAAGCTGCG GTCGAAGGCG CGATGTTGTC CAAATACCGC
AACAGCGGCC AAACCTGCGT ATGCGTCAAT CGCATATATG TTCAGCGCGG CGTCGCCGAA
GCGTTCGTCG AGAAGCTGGC CAAGGCGGCG GCGGATCTGC GCGTCGGACG CGGCACGGAC
GAGGGCGTGA CACAAGGGCC CTTGATTGAC GCCGCGGCGG TGGAGAAGGT CGAAGAGCAT
GTGGCCGATG CGCTGGCCAA GGGGGCAAGG CTCGTCCTGG GCGGAGCCCG TCATGCCTTG
GGGGGCACGT TCTTCGAACC GACAATTCTG ACGAACTGTT CGGCGGACAT GCTCGTCGCG
CATGAGGAGA CGTTCGGTCC TGTGGCGTCG GTCTTCGTAT TCGACGAGGA AGACGAGGCG
ATCGGCTTGG CGAACGCCAG CGAGTTTGGC TTGGCCGGAT ATTTCTACAG CCGTGACCTT
GGCCGGGTGT GGCGTGTGGC CGAAGCACTC GAATGCGGGA TGGTCGGCAT CAACACCGGC
CTGATTTCGA ATGAAGTCGC ACCCTTTGGC GGGATCAAGC AATCGGGCCT GGGACGGGAG
GGCTCGTCAC ACGGGATCAC CGACTATCTC GAACTGAAAT ATCTCTGCAT GGCCGGCCTC
TGA
|
|---|
| Protein sequence | MSLRDPSLLK DQCFVGGAWI GLPQVDVIDP ASGEKIAAVP NCGANETQQA IQAADAALPG
WRGRTAAQRS TIMRRWFEAT IEATEDLALI LSSEQGKPIA EARAEIIYAA SFIEWFAEEA
KRTYGEVIPS PRADARIVVI QQPIGVTAAI TPWNFPAAMI TRKAGPALAA GCTMVLKPAM
QTPLTALALA ALAQRSGVPD GVFNVVTGSA RDIGGELTSN PIVRKISFTG STEIGRLLMR
QGAATVKKMS LELGGNAPFI VFDDADVEAA VEGAMLSKYR NSGQTCVCVN RIYVQRGVAE
AFVEKLAKAA ADLRVGRGTD EGVTQGPLID AAAVEKVEEH VADALAKGAR LVLGGARHAL
GGTFFEPTIL TNCSADMLVA HEETFGPVAS VFVFDEEDEA IGLANASEFG LAGYFYSRDL
GRVWRVAEAL ECGMVGINTG LISNEVAPFG GIKQSGLGRE GSSHGITDYL ELKYLCMAGL
|
|---|
| |