Gene Caul_0556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0556 
Symbol 
ID5898011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp606741 
End bp607427 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content52% 
IMG OID641561038 
ProductTetR family transcriptional regulator 
Protein accessionYP_001682187 
Protein GI167644524 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA CTGATGGCCA CAGATATTCG CTCGTCAGCG ACCTGACTTT CCCACCGCGA 
GAAGGGGGCT ATGCGAACGG GCGCGATACG CGCGAAACGA TCATCAGCGC GGCGTTCCGT
CTGCTCATGG ACGAGGGCTA TCGGGCCATC ACCATGCGCC GGGTCGCAAA GGAATGCGGG
CTGAAGATAG GCAACGTCAC CTATCACTTC TCATCGAGGG AGGATCTTGT CCGCTCGATG
TTTGAGGCCG TAAGTCTGAG CTATCAGGCG GTTGTGACGG ACAAGATTTC GAATGAAGAG
GAACAGCCTG AGGGAAGATT TCGCGATTTG TGCAACTTCT TTCTGGACGA CATTAAGACC
AGGAAGACAA CGATGGTCTT TCCAGAGCTG TGGGCTCTGT CGAATCATGA CGAATTTGTT
TACAATATCG TCAATGATCT GTACGACAGC GCTCGGGAGG TCTTCTTCGA TCTTATTTCG
GAGCTAAGGC CGGATCTGTC TGTGGAACTC CGCAATCAAC TGTCGATCGT GGTGCAGGCT
TCGATTGAGG GAATGACTGT ATTCGCGGGA TACAAGAAGC CGTTTCACGG TCAAATGGAT
CAAATAGAGG CCATAACTGT GAAGGCCTTT ATGGATTTGA TCTCGAACAT CCAAGAGTCT
GACGTTCCTC AAGGCGTTCT GGCCTAA
 
Protein sequence
MSDTDGHRYS LVSDLTFPPR EGGYANGRDT RETIISAAFR LLMDEGYRAI TMRRVAKECG 
LKIGNVTYHF SSREDLVRSM FEAVSLSYQA VVTDKISNEE EQPEGRFRDL CNFFLDDIKT
RKTTMVFPEL WALSNHDEFV YNIVNDLYDS AREVFFDLIS ELRPDLSVEL RNQLSIVVQA
SIEGMTVFAG YKKPFHGQMD QIEAITVKAF MDLISNIQES DVPQGVLA