Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0518 |
Symbol | |
ID | 5897973 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 566989 |
End bp | 568362 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641561001 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001682150 |
Protein GI | 167644487 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.244314 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCA GCGTCTTTGA CCTCTTCAAA CGGGGCGTGG GGCCGTCCAG CTCGCATACG ATGGGGCCGA TGACGGCCGC CGCGCGCTTT GTCGAGGCGT TGCGCAGCGA CGAGAGCCTG GGGCGGGTGC GTGGCGTCAC CGTGACGCTC TATGCCTCGC TAGCCCTGAC CGGGCGCGGT CACGCGACCG ACCGGGCGGT GGTGCTGGGT CTGATGGGCT ATCGCCCCGC CACCCTTGAT CCGGACGAGG GCGATGCGGC CCTGACGCGA TCCGCGCGCG ATCCAAATTG GCGACTGGGC GGTGACGGAC CGCGGATCCA ATTCCTGCCC GACCGTGACA TCCTCTGGGA AAGGTTCACC CGCCTGCCGC TTCATCCCAA TGCGGTGCGC TTCAGTGCCT GTGGCCAGGG CGGGGATCTG CTGACCCAGA CCTACTACTC GACGGGCGGC GGCTTTGTGG CGACCGAGGC GGAACTGTTG TCAAACGCTC CAGGCGACAA CGGCGATGCG CCCTACCCGT TCGCGAGCGC GGCCGAGTTG ATCAGTCTCT GCGAGCGCGA TGGTCTGACG ATCGCCCAGT TGGCCATGGC CAATGAGCGC GCCCTCCGAT CCGAGGCCGA GATCTTGGAG GGACTCGATC AGATTTACGC CGACATGGCC GCCTCCATCG ACAGGGGGTT GCGGCAAGAC GGTATCCTGC CCGGAGGCTT GGCGGTGCGT CGTCGGGCCC TGCAGATTCA TCAAACCTTG CTGACGCGCA TCGATCGGGG CGAGCATGAC GCGCTCGAAG CCATCGACTG GGTCAACCTC TGGGCCATGG CGGTCAATGA GGAGAACGCC GCCGGAGGGC GCGTGGTCAC CGCGCCGACC AACGGCGCCG CGGGCATTGT TCCCGCGGTG CTACGTTACC ATGACAGCTA CCAGGGCGGC GACAAGCACA GCCGCCGCCA GTTCCTGCTC ACGGCGGGGA TCATCGGGGC GCTCTACAAG CAGAACGCCT CGATCTCAGG GGCGGAAGTC GGCTGCCAGG GCGAGGTAGG CGTGGCCTGC TCCATGGCCG CGGCTGGACT GGCGGCGGTG TCGGGCGCAA CGAACGCCCA GATCGAGAAC GCCGCCGAGA TCGGGATGGA GCACAATTTG GGGCTGACCT GCGATCCGAT CGCGGGCCTC GTCCAGATCC CGTGCATCGA GCGAAACGCC GTCGGCGCCA TGAAGGCGAT CGATGCCGCC CGCTTGGCGC TGTTGGGCGA TGGGGCTCAC CACGTCACGC TCGACCAAGT CATCGTCACG ATGAAGCGAA CGGGCGAGGA CATGAACGAA ATCTATAAGG AAACATCGCT GGGCGGACTG GCGGTCAACG CCGTGGCGTG TTGA
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Protein sequence | MTISVFDLFK RGVGPSSSHT MGPMTAAARF VEALRSDESL GRVRGVTVTL YASLALTGRG HATDRAVVLG LMGYRPATLD PDEGDAALTR SARDPNWRLG GDGPRIQFLP DRDILWERFT RLPLHPNAVR FSACGQGGDL LTQTYYSTGG GFVATEAELL SNAPGDNGDA PYPFASAAEL ISLCERDGLT IAQLAMANER ALRSEAEILE GLDQIYADMA ASIDRGLRQD GILPGGLAVR RRALQIHQTL LTRIDRGEHD ALEAIDWVNL WAMAVNEENA AGGRVVTAPT NGAAGIVPAV LRYHDSYQGG DKHSRRQFLL TAGIIGALYK QNASISGAEV GCQGEVGVAC SMAAAGLAAV SGATNAQIEN AAEIGMEHNL GLTCDPIAGL VQIPCIERNA VGAMKAIDAA RLALLGDGAH HVTLDQVIVT MKRTGEDMNE IYKETSLGGL AVNAVAC
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