Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0516 |
Symbol | |
ID | 5897971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 562872 |
End bp | 565193 |
Gene Length | 2322 bp |
Protein Length | 773 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641560999 |
Product | TonB-dependent receptor |
Protein accession | YP_001682148 |
Protein GI | 167644485 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.756879 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTTC GTAATTGGCT CATGGTCACG GGCGGCGCAT CGGCGCTGCT GGCCTGCGCA TCGACGGCCC TCGCCCAGAC TTCGGCGGGC GAGCGGGCTG CGGCGAGCGA CCAGATCGAA GAGATCGTCG TGACCGCCCA ACGCAGGGCG CAGTCGATCG ATGACGTCGG GATGACCCTG AATGTGGTGA GCAACCAACA ACTGCAGCGT CAAGGCGTCA CCCAGGCCTC GGATCTCGTC AAGGTCGTTC CAGGCTTCAC CGTCGCGACC AACAGCGACG GCACACCGAT CTATACCTTG CGCGGCGTGA GCTTCAATTC GCTCAACATC GGCACCTCGC CCACCGTCAG CGTCTACATC GACGAGGCCT CGATCCCCTT CTCGATCATG ACCCAGGGCG GCCTGCTGGA TCTGGAACGG GTCGAGGTCC TGAAGGGGCC CCAGGGCACC CTTTATGGAC AAAACGCCAC GGGCGGCGCG ATCAACTACA TCACCGCCCA GCCCACCGAA ACGCTCGCTG GCGGCGTCAA GGCGAGCTAC AGCCGGTTCG ATACCTTCCA GACGGAGGCC TTTGTCAGCG GTCCCGTCAC CGACACGCTG AACGCCCGCC TGGCGGTGAG CGGCGTGCGG TCAGGGCCCT GGCAGAAAAG CGCGACGCGG GACGACGAGC TGGGCGATCA GCGCAAGCTG GCCGCGCGCC TGATCCTCGA CTGGCGACCT GTCGAGGCCC TTCGCTTCAA TCTCAATGTC AATGGATGGG GCGATTGGTC CGACACCCAG GCCCCGCAAT TTATCCAAGC CAAGCCAAAC GCCCCGGCCT TCGCGTCTCC CCTCCTCAAC ACCATCGCGC CCAACGACAC CAGTGCTCGG CTAGCTGATT GGGATGCGGA CAAGACGTAT CGCAAGAACA ACAAATTCTA CCAGGCAGCC TTGCGCGGCG AGCTAAAGAT TTCCGATCAC GTGCAGCTGA CCTCGCTGAC CGACTATACC TATATCAGCG TGCACTATCG CAACGACAAT GACGGATCGT CCTATTTCGT TTCGAACATG GAGAACGACG GCTTTGCGCG CGCCTGGAAT CAGGAACTTC GCCTGTCCGG AGACGTGGTG GACGGTCGCC TCAAGTACAT CGTCGGCGCC AGCTACCAAC AAGACGACTC CCTGGAGGAC AACACCTTCA CGGGCGCCTT GATTTCGTCG CAAGAGACGC CATTCGGTCG CTTCGCCGCC GCCCAGGCGC ACGGCCGCCA AGCCAATCGG GCGCAAGCCG GATTCGCCAA TGTGGATTTC GAGCTCACCA AGCGCCTGAC GCTTTCGGGC GGCGCCCGCT ACACCGAGGT CAAGCATGAC ACCGAAAGCT GCACACGCGA CGCCGGCGAT GGCGAGCTGG CGGCGGTCGC AACCCAGCTT AGCGCCTATC TGCGCAGCCT CGCGGGCCTA CCGCCGGGCG CGACGATCCC TCCGGGCGGC TGCGTGAGCA CCGGCCCGGA CCTTCTCCCC TATCACCAGG TGGAGTCGTT CAAGGAACAC AACGTCTCTT GGCGTCTGAA CCTGAACTAC GAACTTAATC CCGACGCCCG CCTCTACGCC ACCGCCTCGC GCGGCTACAA GGCCGGCAAC TATCAGGTGG CCGTGAACTC CAGCTACGTA TCCTTCCCCC CGGTTCACCA GGAAGAGCTG ACCGCCTATG AAGTCGGCGC GAAACTGAAG CTTCTGGATC GCCGGCTGGC TCTGAACGCT GCGGTTTACT ACTACGACTA CCAAGATAAG CAGTTGCTGA CGCTGACGCA GGATCCGGTC TTTGGCCTGC AGTTCTCGCT GGTCAACGTG CCCAAGTCGT CCGTCAAAGG CTTCGACGCC GACATCACCT GGCTCCCCGT CCGTGGCCTG ACGATCCGCG CCGCGACGAC CTATGCCGAC AGCGCGATCG ACAAGTTCCA GGGCTTCGAC GTGTTTGGCG CCCCCGCGGA CCTTTCGGGC AAGGCGTTCA ACCTCACTCC CAAATGGATC GGCGTCGGCG ACGTCGAATA CCGCCACGAC CTCAGCGGCG AATATGAAGG CTTCGTCGGC GCCAGCTTGA ACTACAACAG CAAGACCTAC GCCGATATCG CCGGCAGCGA TGTCCTGGGC ATTGGGGCCT TCACCCTGGT TGACCTTCGC GCCGGGGTCT CCTCCACGGA CGGACGTCGC GAGGCCATGG TGTTCGTCAA GAACGCCACT GACAAATATC ACTGGAGCTA CGCCCAGCCC GGCGGCGACA GCGTCCTGCG CTATGCATCC CAGCCCAGGA CCTTCGGGAT CACGCTCTCC CAGCACTTCT GA
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Protein sequence | MKLRNWLMVT GGASALLACA STALAQTSAG ERAAASDQIE EIVVTAQRRA QSIDDVGMTL NVVSNQQLQR QGVTQASDLV KVVPGFTVAT NSDGTPIYTL RGVSFNSLNI GTSPTVSVYI DEASIPFSIM TQGGLLDLER VEVLKGPQGT LYGQNATGGA INYITAQPTE TLAGGVKASY SRFDTFQTEA FVSGPVTDTL NARLAVSGVR SGPWQKSATR DDELGDQRKL AARLILDWRP VEALRFNLNV NGWGDWSDTQ APQFIQAKPN APAFASPLLN TIAPNDTSAR LADWDADKTY RKNNKFYQAA LRGELKISDH VQLTSLTDYT YISVHYRNDN DGSSYFVSNM ENDGFARAWN QELRLSGDVV DGRLKYIVGA SYQQDDSLED NTFTGALISS QETPFGRFAA AQAHGRQANR AQAGFANVDF ELTKRLTLSG GARYTEVKHD TESCTRDAGD GELAAVATQL SAYLRSLAGL PPGATIPPGG CVSTGPDLLP YHQVESFKEH NVSWRLNLNY ELNPDARLYA TASRGYKAGN YQVAVNSSYV SFPPVHQEEL TAYEVGAKLK LLDRRLALNA AVYYYDYQDK QLLTLTQDPV FGLQFSLVNV PKSSVKGFDA DITWLPVRGL TIRAATTYAD SAIDKFQGFD VFGAPADLSG KAFNLTPKWI GVGDVEYRHD LSGEYEGFVG ASLNYNSKTY ADIAGSDVLG IGAFTLVDLR AGVSSTDGRR EAMVFVKNAT DKYHWSYAQP GGDSVLRYAS QPRTFGITLS QHF
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