| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0197 |
|---|
| Symbol | |
|---|
| ID | 5897471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 214561 |
|---|
| End bp | 214998 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641560681 |
|---|
| Product | biopolymer transport protein ExbD/TolR |
|---|
| Protein accession | YP_001681832 |
|---|
| Protein GI | 167644169 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0848] Biopolymer transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.058797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.711097 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGA AACTTTCGGG CGGCGGCGGC GGGCGCTACG CGATCCGCCA GAACGCGGAC
ATCAACGTCA CGCCCTTCGT CGATATCCTG CTGGTGCTGC TGATCATCTT CATGGTCGCC
GTGCCGGTGG CCACCACCGC GATCAAGGTG GACCTGCCGC CGGCCTCGGA TCGGGTCACA
CCCCAAAAGC CCGTGCTGAT CGCCATCCAG GCCTCGGGCG CGCTGTTCCT GGCCGGCCAG
CCCACCAGCC TCAAAGCCCT GGCCAGCGAC CTGAGCGCTC GCTTCGTCGC CGAGGGTCAG
GCCGGACCGC GCAAGGAACA GCGGGTGATG GTCATGGCTC AGGTCGACGT GCCCTACGAG
GCCTTCATGG GCGTGATCAA CCAGGTTCAC GCCGAGGGTT GGACCAAGGT CGGGATCGTG
AATGAGGATA TTCACTGA
|
|---|
| Protein sequence | MAAKLSGGGG GRYAIRQNAD INVTPFVDIL LVLLIIFMVA VPVATTAIKV DLPPASDRVT
PQKPVLIAIQ ASGALFLAGQ PTSLKALASD LSARFVAEGQ AGPRKEQRVM VMAQVDVPYE
AFMGVINQVH AEGWTKVGIV NEDIH
|
|---|
| |