| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0167 |
|---|
| Symbol | rph |
|---|
| ID | 5897879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 186297 |
|---|
| End bp | 187025 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641560651 |
|---|
| Product | ribonuclease PH |
|---|
| Protein accession | YP_001681802 |
|---|
| Protein GI | 167644139 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0689] RNase PH |
|---|
| TIGRFAM ID | [TIGR01966] ribonuclease PH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.43547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCGT CCGAACGCGC CCCCGACGTT CTTCGCGTCG TCACCCTGGA AACGGGCGTC
AACCGCTATG CCGAAGGATC GTGCCTGATC AGCTTTGGCC ACACCAAGGT GCTGGTCACC
GCCACGGTCG AGGAGAACGT CCCCGGCTGG ATGCGCAACA AGGGCGCCGG CTGGGTGACG
GCCGAGTACG GCATGCTGCC GCGCGCCACC CACACCCGCG GTCGCCGCGA GGCCGCCCTG
GGCAAGCAGA GCGGTCGCAC CCAGGAGATC CAGCGGCTGA TCGGACGCAG CCTGCGGGCT
GTCGTCGACC TCAAGGCCCT GGGCGAGCGC CAGATCAGCC TCGACTGCGA CGTCCTCCAG
GCCGACGGCG GCACCCGCAC CGCCGCCATC ACCGGCGCCT GGGTCGCCTT GCGCATCGCC
GTCAACTACC TGCTGGAAGA GGGCGTGCTG AAGACCGACC CGATCGTCGG CCAGGTGGCT
GCCGTCTCGT GCGGCGTCTT CAAGGACACC CCAGTGCTCG ACCTCGACTA CGAGGAGGAC
AGCCAGGCCG AGGCCGACAG CAATTTCGTG CTGACCAATG TCGGCGACAT CGTCGAGATC
CAGGCCACGG GCGAGAAGCG CGGCTTCACC CGCGGCGAGT TCGAGCAGTT GTTCGCTCTG
GCCGAGAAGG GCATCGGCGA GCTGTTCGTG AAGCAGCTGG AAGCGGTTTC GGCGGCGAAG
CCCCGCTGA
|
|---|
| Protein sequence | MRPSERAPDV LRVVTLETGV NRYAEGSCLI SFGHTKVLVT ATVEENVPGW MRNKGAGWVT
AEYGMLPRAT HTRGRREAAL GKQSGRTQEI QRLIGRSLRA VVDLKALGER QISLDCDVLQ
ADGGTRTAAI TGAWVALRIA VNYLLEEGVL KTDPIVGQVA AVSCGVFKDT PVLDLDYEED
SQAEADSNFV LTNVGDIVEI QATGEKRGFT RGEFEQLFAL AEKGIGELFV KQLEAVSAAK
PR
|
|---|
| |