Gene Caul_0162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0162 
Symbol 
ID5897874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp182015 
End bp183133 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content67% 
IMG OID641560646 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001681797 
Protein GI167644134 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.281652 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.419565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTA CCATTGAGCG GGCGGCGCTG CTGAAAGCGC TGGGTCACGT GCAGAGCGTC 
GTTGAGCGCC GCAACACCAT CCCGATCCTG TCGAATATCC TGCTGTCGGC CGATCGCGAC
ACCCTGTCGT TCTCGGCCAC CGACCTGGAC ATGGAGATCA TCGACGAGGG CCTGGCCCAG
ATCGACATCC CCGGCCAGAT CACCGCCCCG GCCCACACGC TGTATGAAAT CGTCCGCAAG
CTGCCGGACG GTTCGGACGT CTCGCTGAGC TTCAGCGGCG ACGATCCCCG CCTGGTGATC
CAGGCCGGCC GCTCGCGCTT CAACCTGCCG GTGCTGCCGG CCGGCGACTT CCCGGTGATG
AGCAGCGACG GTCTGTCGGG CCGGATCTCG GTCGACACCA ACGAGCTGAT CCGGCTGATC
GACAAGACCC GCTTCGCGAT CTCGACCGAA GAGACCCGCT ACTATCTGAA CGGCCTCTAT
CTTCACACCG TCAACGACGG CGGCGAGGTC AAGCTGCGCG CCGTGGCCAC CGACGGTCAC
CGCCTGGCCC TGGCCGAGAT GGCCGCCCCC GAGGGCGCGG CCGGCCTGCC TGGGATCATC
GTGCCGCGCA AGACCATCCA GGAGGCCCGC CGCCTGATGG AATCGGCCGG CGAGCAGGTC
GACCTGCAGA TCTCGGCCCA GAAGGTTCGA TTCGAATTTG GCCGCGCGGC CCTGACCTCC
AAGGTCATCG ACGGGGCCTT CCCCGACTAT CTGCGGGTCA TCCCGCGCGA CAACGCCAAG
ATCCTGACCC TGGATAACGA CCTGTTCGCC AAGGCCGTCG ACCGGGTGGC CACCATCTCG
GCCGAGAAGA GCCGCTCGGT GAAGCTGGCC GTCGAGCCGG GCCGCATCAC CCTGACCGTC
CGCAACATGG AAGCGGGCCA GGCCGTCGAA GAGGTCGAGG TCGACTATGA CGGCGAGGCC
TTCGAGATTG GCTTCAACGC CCGCTACCTG CTGGACGTCT GCGGCCAGAT CGGCGGCCCG
ATCGCCGAAT TCCGCTTCGC CGACCCGGCC AGCCCGACGC TGGTGGTGGA TCCGACCGAC
CCGGGCGTGA AGTACGTGCT GATGCCGCTG CGGGTGTAG
 
Protein sequence
MKLTIERAAL LKALGHVQSV VERRNTIPIL SNILLSADRD TLSFSATDLD MEIIDEGLAQ 
IDIPGQITAP AHTLYEIVRK LPDGSDVSLS FSGDDPRLVI QAGRSRFNLP VLPAGDFPVM
SSDGLSGRIS VDTNELIRLI DKTRFAISTE ETRYYLNGLY LHTVNDGGEV KLRAVATDGH
RLALAEMAAP EGAAGLPGII VPRKTIQEAR RLMESAGEQV DLQISAQKVR FEFGRAALTS
KVIDGAFPDY LRVIPRDNAK ILTLDNDLFA KAVDRVATIS AEKSRSVKLA VEPGRITLTV
RNMEAGQAVE EVEVDYDGEA FEIGFNARYL LDVCGQIGGP IAEFRFADPA SPTLVVDPTD
PGVKYVLMPL RV