| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0046 |
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| Symbol | |
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| ID | 5897758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 56597 |
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| End bp | 59302 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641560529 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001681682 |
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| Protein GI | 167644019 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.135172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.385882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCGC CCCCCGTCGA CAGCGCCGTC ATGCCCGCCC GGCTCAGCGA CGCTGAAAGC
GCGCGGTGGT TCTTCGACCA TTCGCACGAC CTGTTCGCCG TGGTGTCGCG GGGCCGGTTC
GCCACCGTCA ACCCGGCCTG GACCCGGGTG ACGGGTTGGA GTCGCCAGGA TCTGGTCGGC
CAGCCCGCCC TGCGCTTCGT GCATCCGGAG TCGCGCCAGG ACTTCATCGA GACCGCCAGC
CTGATCCGCG CCGCCGGCGA GGCGTTCAAC CGCCTCAAGG TGGTCTGCAA GAACGGCGGC
TGGGTGTGGT TAGAGAGCCA GTCGCGCCTG GGTCCCAACG GCGAGATGGT CGGCGCCTTG
CGCGACGTCA CCGCCGACAT GGCCCGCCGC GCCGAGCTGG CCGTCGCCCG CCAGACCCGC
GAGCTGCTGG CCTCGTCGGC GGGCATCGGC GTCTGGAGCT ACGAGCCGCA CGGCCAGCAC
ATCGAGTGGT CGCGCGACAT CCTGACCGTC ACCGGCCTGG AGCCCGAGGA TATCGCCCAG
CCCGACCAGT TCTACGATCG CCTTGACCCG GCCGAGCGCG AGGGTCTGCG GGCGACGTTC
GACGCCGCCG TGCGCACCGG CGAGGGCGCG ACCATCGAGC ACCGGCTGCG CGGAGCCGGC
GACCAATGGT TCACCTACCG CGCCACCTTC CGCACCGAGC CGCGCGGCGA CGGCCTGTTC
GCCTTGAAGG GCATCTCCCA GAACGTCACC GACGTGGCCC GGACCCGCGA CGCCGCCGTC
TGGGGCGAAC GCCAGGCCCG CCGGCTGGTC GAGGAGGCGC CGTTCGCCGT GGCGCTCTAT
GACCGCGACC TGCGTCTGCG GGTGGTCAGT CCGCGCTTCC TGGAGATCTT CCAGGCCACA
GAGGAAGGCG TGATCGGCCG CAGCCTGCAC GACCTGACCT CGGGAACCCG CCGGCGCTTC
GTCAACGCCG TCGAACGAGC CTTGACCGGC GAGACGGTGG TGCGCCGCGA GGACCAGCTG
CGTGACGCCC TGGGCCGCAG CCACACCCTG CGCTGGGAGG CCCGGCCCTG GCGCGACGCC
GACGGCGAGA TCGGCGGCGT CATCACCTAC ATGGACGATG TCACCGCCCT CTCGGACGCC
CGCCGCGAGG CGCGGGTCAA CGCCCGGCGG TTGCGGGTGG CGCTCGGCGC GGCCCAGGCG
GGGGTCTACG AGATCGACCA CGTGGACAAG GCCTTCTGGG GCTCGCCCGA GTTCCATCGG
ATCCTGGGCC GCCGGATCAG CTATGAGGAC GTGCGCAGCG CCGTCTGGCC GATGATCCAC
CCCGACGACG TGGCCTCGGT CTACGACGCC TCGGACGCCT GGCTCGGCAA GCGTGAGGAT
GGGGGCGGGC GCTCGTTCGA CGTGCGGGTG GTCACCGGCC GCGGCGAGAC GCGCTGGATC
CGCATCTTCC ACGAGGTGCG CCAGGACGCC GGCGGCCGGA TCCGCAAGGC GTTCGGCCTG
ATCCTCGACA TCGACGACAA GAAGCGCGCC GAACTGGCCC TGGTCGAGGC CGAGCGCGCC
GCCCAAGCCG CCAACGAGGC CAAGGCCCAG TTCCTGGCCA ATATGAGCCA CGAGATCCGC
ACCCCGATGA ATGGGGTGCT GGGGGTGATG CACCTGCTCA AGCGGGAGAA GCTGCCGGGC
GACGCCGACC ACCTGCTGGG CGAGGCCCTG GCTTGCGGCC GGATGCTGTC GACCCTGCTG
GACGACGTGA TCGACTTCTC GCGCATCGAG GCCGGGCGGC TCGACGTCAC CCGCGAGGCG
GTCGATCCCA GCGAACTGGC GATGAGCGTG GCGCGGCTGC TGCGCGCCCA GGCCGAGCAC
AAGGGTCTGG AACTGCGGGT CGAGGCCCCG GATCTGGGCC TGATCCTCAC CGACCCCAGT
CGTCTGCGCC AGGCGCTGTT CAACCTGGTG GGCAACGCCG TGAAGTTCAC GCTGGCGGGC
TCGGTGACCC TGAAGGTGCG CCTGCTGGAC GGGGGCGGCC CCCAGGACGT TCCCAAGATC
GTCTTCGAGG TGATCGACAC CGGGGTCGGC ATCGCCGCCG AGGCTCAGGC GCGACTGTTC
GAGCGCTTCC AGCAGGCCGA CGCCAGCACC ACCCGCCGCT TCGGCGGGTC GGGCCTGGGC
CTGGCCATCA CCCGGCGGCT GGCCGAGATG ATGGGCGGCG AGGTCGGCTT CACCTCTCGC
GAGGACGCCG GCTCGACCTT CCTGCTGACC ATCGCCGCCC CGCCGGCCCA AGCCCGCGCG
GTCGAGTCCG AGATTGCGGA TGGGCTGCTG CAGGGCCTGA AGATCCTGGT GGTCGAGGAC
AACGCCACCA ACCGCCTGGT GGCGCGCCGC ATCCTCGAGC AGCTGGGCGC CAAGGTCGAG
ACGGCCGAGG ACGGGCTGGA CGGCGTGACC ACGGCGGCGC GTGGCTTCGA CCTGATCCTG
ATGGACGTCC AGATGCCCGG CATCGACGGG CTGGAGGCCG CCCGCCGCAT CCGCGACCTG
CCGGGTCCCG CCGCCCGCAC CCCGATCATC GCCCTGACCG CCAACGTCCT GTCGCACCAG
CGGGCCGCCT ATCTGGCCGC CGGCATGGAC GGCGTCGCCG CCAAGCCGAT CGTTCCGGCC
GCCCTGATCG GCGAGATCCT CCGGCTGGCG GGCGCGGAGA GCGGGGAAGC GGCGGCGGTG
GCCTAG
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| Protein sequence | MSPPPVDSAV MPARLSDAES ARWFFDHSHD LFAVVSRGRF ATVNPAWTRV TGWSRQDLVG
QPALRFVHPE SRQDFIETAS LIRAAGEAFN RLKVVCKNGG WVWLESQSRL GPNGEMVGAL
RDVTADMARR AELAVARQTR ELLASSAGIG VWSYEPHGQH IEWSRDILTV TGLEPEDIAQ
PDQFYDRLDP AEREGLRATF DAAVRTGEGA TIEHRLRGAG DQWFTYRATF RTEPRGDGLF
ALKGISQNVT DVARTRDAAV WGERQARRLV EEAPFAVALY DRDLRLRVVS PRFLEIFQAT
EEGVIGRSLH DLTSGTRRRF VNAVERALTG ETVVRREDQL RDALGRSHTL RWEARPWRDA
DGEIGGVITY MDDVTALSDA RREARVNARR LRVALGAAQA GVYEIDHVDK AFWGSPEFHR
ILGRRISYED VRSAVWPMIH PDDVASVYDA SDAWLGKRED GGGRSFDVRV VTGRGETRWI
RIFHEVRQDA GGRIRKAFGL ILDIDDKKRA ELALVEAERA AQAANEAKAQ FLANMSHEIR
TPMNGVLGVM HLLKREKLPG DADHLLGEAL ACGRMLSTLL DDVIDFSRIE AGRLDVTREA
VDPSELAMSV ARLLRAQAEH KGLELRVEAP DLGLILTDPS RLRQALFNLV GNAVKFTLAG
SVTLKVRLLD GGGPQDVPKI VFEVIDTGVG IAAEAQARLF ERFQQADAST TRRFGGSGLG
LAITRRLAEM MGGEVGFTSR EDAGSTFLLT IAAPPAQARA VESEIADGLL QGLKILVVED
NATNRLVARR ILEQLGAKVE TAEDGLDGVT TAARGFDLIL MDVQMPGIDG LEAARRIRDL
PGPAARTPII ALTANVLSHQ RAAYLAAGMD GVAAKPIVPA ALIGEILRLA GAESGEAAAV
A
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