| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_0044 |
|---|
| Symbol | |
|---|
| ID | 5897756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 53347 |
|---|
| End bp | 55731 |
|---|
| Gene Length | 2385 bp |
|---|
| Protein Length | 794 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641560527 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_001681680 |
|---|
| Protein GI | 167644017 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.236212 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGC TTTCCACGCC CGCCGTCGCC GGCGTCCGCA GCCAAGTCCG CCGCGCCCTC
GGGGCCGCGG CCGTCGCCGG TGTCGCGGGC CTGGCCCTGG CGCCCGTCGC CTTCGCCGCC
GCGCCCGACG CCGAGGCGCC GCTGGCCACC GCGCCGGCCG ACACCCTCGC CGACAACCAG
GTCTCGGGCG TCCAGGTCGA TGGCAAGCGC GCCGCCGCCG TCGAGTCGCC CAAGCTGACC
GCGGCGCTGG TCGACACCCC CAAGGCGATC ACCGTCATCC CGCAACGGAT CATCGAGCAG
ACCGGCGCCA CCTCGCTGCA GGACATCCTG CGCACCTCGC CGGGCATTAC CTTCGGCGCG
GGCGAGGGCG GCCAGCCCCT GGCCGACCGT CCGTTCATCC GCGGCCAGAG CTCGGCCAAC
AACATCTTCG TCGATGGCGT GCGCGACACC GGCGGCCAGA CCCGCGAGGT CTTCGACCTG
GAGCAGGTCG AGGTCGTGAA GGGGCCGGAC AGCGCCTATA GCGGCCGCGG CTCGGGCGGC
GGCAGCATCA ACCTGTCGTC CAAGAGCCCC AAGGCCGACG ACTTCGCCCG CGGCGCGCTG
GGCGTCGGGA CCGACGCCTA TGTCCGCGCC ACGGTCGACC TGAACCACCA GCTCAACGAC
AACGTCGCCG TGCGCCTGAA CCTGCTGGGG ACACAGGGCA ATACCCCGGG CCGCAAGGCG
GTGGACTTCG ACCGCTGGGG GATCGCCCCG TCGATCGCCT TTGGCCTGAA CGGCCCGACC
AAGGCGGTGC TCAGCTACTA CCACCTGGAT GGCGACCAGA TGCCCGACTA CGGCGTCCCG
CTGTTCACCA AGGTTCCAAG CCTGCCCCGC GACGCCTCGG GCGTCCTGCA GGTGGACCGC
GACACCTTCT ACGGCCTGAA GGCCCGCGAC TACCAGAAGA CCAAGGCCGA CATCGTCACC
CTGGCCGTCG ATCACCAGAT CAACGACAAC CTCGGCGTCC GCCAGGTGGT CCGCTATTCC
AAGACCCTGA ACGACTACAT CCTGACCAAT CCCGGCGACG CCGGCGCGGC GCAGTTCATC
GACGGCGTCT GGTGGATGAA GCGCGGGACG AAGACTCGCT GGAACCCGAC CACCACCATG
GCCGCGGTCA CCGATCTGCA TGGCAAGTTC ACCACCGGCG CGATCGAACA CAGCTTCGAC
CTGGGGCTGG AACTGAGCCA CGAGAAGAAC CTCAACGCCG CCTATTCGAC CTTCGCCACC
TCGGGCGCGG CCTGTCCCGC GGGCTACAAG TACGGCGTCA GCGGCGCGGT GACGACCAAG
GAGGTGCTGG GCGCCGGCGA CTGCACCAAC GTCTTCGCCC CCAACGCCGC CGATCCGTGG
ACCGGGATCA CCAATCGCGG CCCGGCCAAC TACAACCTCG CCAAGACGGC GGCGATCTAC
GGCTTCGACA CCCTGAAGTT CGGCGACAAG TGGCTGCTGA ACCTCGGCGT CCGCCGCGAC
AGCTACCAGA GCGTCGGCCA CGACTACACG AGCACCAACG CCGGCGGTGT GTTCACGATC
ACCGGGATCA CCTACCGCAA GGCCGAGTGG AACTTCACCA ACTACCAGGC CGGCCTGGTC
TACAAGCCGA CCGAGGAGTC CAGCGTCTAC GTCTCCTACG GCACCGCCTC GACCCCGCCC
GGCGTGGCGG GCGGCGACCA GAACGGCAAT GGCACCAACG GCGCGGGCAA CCTGGCGGGC
CAGGTTCTCG AGCCGGAGGA GAGCAAGAGC TTCGAGGCCG GCGCCAAGGC CAACGTGTTC
CACGACACGC TCGCCCTGTC GGCGGCGCTG TTCAAGACCA CCCGCAAGAA CGCCGCGATC
CTGATCGACA ACGGCGTCTA CGCCCAGGTT GGCGAGACTC AGGTCAAGGG CTTCGAGCTG
GGCGTTTCCG GCAACATCAC CCCCAAGTGG CAGGCGTTCG GCGGCTACAC CTACATGGAC
AGCGAACTGG TGCGCGGCGC GGTGACCATT CCGACCGGCG GCGGCGCGCC CGTTCCCAGC
GTCAACCAGG GCGACCCGCT GGCCAATACC CCCAAGCACA CCTTCAGCCT GTTCACGACC
TACCGCGTGG TGCGTGGCGT GTCGCTGGGC GGCGGCGCCT ACTACGTCTC CGACAGCTTC
GGCGGCAACC AGGGCGGCGC GGGCGGCGGG GCCAACAAGG TCTACGCCCC GGCCTACTGG
CGCTACGACG CCTTCGCCAG CTACGCGATC AACGACAAGA TGGACCTGCA GCTCAACGTC
CAGAACCTGA CCGACGAGCG CTACATCAGC AAGACCAATG GCGTGCACCA TGCCGACCCG
GCCCCGGGCC GGCAGGCGAT CCTGACCTTG AACGTCAAGT ACTGA
|
|---|
| Protein sequence | MQKLSTPAVA GVRSQVRRAL GAAAVAGVAG LALAPVAFAA APDAEAPLAT APADTLADNQ
VSGVQVDGKR AAAVESPKLT AALVDTPKAI TVIPQRIIEQ TGATSLQDIL RTSPGITFGA
GEGGQPLADR PFIRGQSSAN NIFVDGVRDT GGQTREVFDL EQVEVVKGPD SAYSGRGSGG
GSINLSSKSP KADDFARGAL GVGTDAYVRA TVDLNHQLND NVAVRLNLLG TQGNTPGRKA
VDFDRWGIAP SIAFGLNGPT KAVLSYYHLD GDQMPDYGVP LFTKVPSLPR DASGVLQVDR
DTFYGLKARD YQKTKADIVT LAVDHQINDN LGVRQVVRYS KTLNDYILTN PGDAGAAQFI
DGVWWMKRGT KTRWNPTTTM AAVTDLHGKF TTGAIEHSFD LGLELSHEKN LNAAYSTFAT
SGAACPAGYK YGVSGAVTTK EVLGAGDCTN VFAPNAADPW TGITNRGPAN YNLAKTAAIY
GFDTLKFGDK WLLNLGVRRD SYQSVGHDYT STNAGGVFTI TGITYRKAEW NFTNYQAGLV
YKPTEESSVY VSYGTASTPP GVAGGDQNGN GTNGAGNLAG QVLEPEESKS FEAGAKANVF
HDTLALSAAL FKTTRKNAAI LIDNGVYAQV GETQVKGFEL GVSGNITPKW QAFGGYTYMD
SELVRGAVTI PTGGGAPVPS VNQGDPLANT PKHTFSLFTT YRVVRGVSLG GGAYYVSDSF
GGNQGGAGGG ANKVYAPAYW RYDAFASYAI NDKMDLQLNV QNLTDERYIS KTNGVHHADP
APGRQAILTL NVKY
|
|---|
| |