Gene Caul_0036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0036 
Symbol 
ID5897748 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp43559 
End bp45103 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content67% 
IMG OID641560519 
ProductTPR repeat-containing protein 
Protein accessionYP_001681672 
Protein GI167644009 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.83786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.225653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTAT TGTTTCTGTT GCTGGTGCTT CTTGCCGCAC CGTCCGTAGG CCTCGCCAAC 
TCCAACTTCA CCCGCACGAA CCCGCCCGGC CCGCACGCGG TGGGACTGAA GGTCGTCGAG
CAATACGATT TCTCCCGCGC CTATCGCGGG CTCACCGACG TCGCCACGGG CAAGGTGGTC
ACCGGAGAGC GAGCGCGGCC GATCCAGACC TTTGTCTGGT ACCCTGCGGC GAACACCGCG
AAACCGACCA TGACCGTCGC CGACTATCTC AAGATCGGCG CCAGCGACGA CGATTTCGAG
CACACCCCCG CCGAGCGCGC GGCCCTGGAG GCCGCGTTCG CCCAGCAACG GACCGGCGCC
CTGTCGCCGC AGCGCGCCAA GGCCGAGTTG GCCGCGCCGA TGCAGGCCCA TCGTGACGCC
GCCGCCGTAT CAGGCAAGTT CCCGGTCGTG ATCTACGCCC CCAGCTTCAG CGCCTGGGCG
TTCGAGAACG CCGACCTGTG CGAATACCTG GCCAGCCAGG GTTATGTGGT CATCGCAAGC
CCCAGCCTGG GTCAGGCTCA GCGCGACATG GCAACCGACC TAGAAGGTCT CGAGACCCAG
GCGGGCGACA TCGAGTTCCT GATTGGCTAC GCCCATGGCC TGCCCCAGGC CGACACCAAC
CGCTTGGCCG TGATCGGCTA TAGCTGGGGC GGCCTGGCCA ATGTCCTGGC CGCGGCCAAG
GACAGCCGCA TCGACGCCCT GGTCGCCTTG GACGGCTCGG TCCGGTACTG GCCCCAGTTG
CTCAAGCAGG CCGCCTACGC CACCCAGGCC CGCGCCACCG CCCCGCTGCT CTTTATCGCC
GCCCGGCCGC GTGAGATCGA GGACCTGGCG GAGGGGCGCA ACGAGGTCAC CAGTCCGCTC
AACCACATGA AATATGCCGA TGTCTACCGC GTGACGCTGG CCCCGATGGT GCATGAGAAC
TTCTCGGTGA TGTTCGGCCA GCGCCTGCTG GGCGACAGCC GTTACAGGGA GTACGACAAG
GATGAGCTGT CGACAGCAAC CGCCTGGATG GAGGCCTATG TCCGCCGGTT CCTGGACGCC
TATCTGAAAG GCGACGCGGC CAGCCGGACG TTCCTGGACC TGCCGGCCGC CAAGAGCGGC
GCGCCCGCCC ACCTACTGAC CACCCACGTG ACCCACAGCC AGGGTGCGCC GCCGACCCGC
GCGGCTTTCG CCGCCGAACT GGCTCGCCAG GGCTTCGGCA AGGCTTCGAG CGTCTACCAA
GCCTTCAAGG CCAGGGAGCC CGACTTCACG CTCTCCGACG ACGAGCTTGT AAGCTGGGCT
TACCAGCGCA TGGGCGACGG CGACGTCGGC GCGGCGGTCG CCCTGCTTCG GCTGGACACC
GAGATCCACG CGGACAGCTG GAACGCCTTC GACAGCCTGG GCGAGGCCTA CGCCAAGAAC
GGCGACAAGG CCCCGGCGAT CGCCGCCTAC CGCCAGTCTC TGGTGCTGAA CCCGAAGAAC
ACCAACGGGG TCGAGCAATT GAGAGCGCTC GGGGTGCAGC CTTAG
 
Protein sequence
MRVLFLLLVL LAAPSVGLAN SNFTRTNPPG PHAVGLKVVE QYDFSRAYRG LTDVATGKVV 
TGERARPIQT FVWYPAANTA KPTMTVADYL KIGASDDDFE HTPAERAALE AAFAQQRTGA
LSPQRAKAEL AAPMQAHRDA AAVSGKFPVV IYAPSFSAWA FENADLCEYL ASQGYVVIAS
PSLGQAQRDM ATDLEGLETQ AGDIEFLIGY AHGLPQADTN RLAVIGYSWG GLANVLAAAK
DSRIDALVAL DGSVRYWPQL LKQAAYATQA RATAPLLFIA ARPREIEDLA EGRNEVTSPL
NHMKYADVYR VTLAPMVHEN FSVMFGQRLL GDSRYREYDK DELSTATAWM EAYVRRFLDA
YLKGDAASRT FLDLPAAKSG APAHLLTTHV THSQGAPPTR AAFAAELARQ GFGKASSVYQ
AFKAREPDFT LSDDELVSWA YQRMGDGDVG AAVALLRLDT EIHADSWNAF DSLGEAYAKN
GDKAPAIAAY RQSLVLNPKN TNGVEQLRAL GVQP