Gene Caul_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0028 
SymboltrmB 
ID5897740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp34182 
End bp34862 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content71% 
IMG OID641560511 
ProducttRNA (guanine-N(7)-)-methyltransferase 
Protein accessionYP_001681664 
Protein GI167644001 
COG category[R] General function prediction only 
COG ID[COG0220] Predicted S-adenosylmethionine-dependent methyltransferase 
TIGRFAM ID[TIGR00091] tRNA (guanine-N(7)-)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.125198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.674789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCATC CCCAACAGCC CCACGGGCCG CTGCGCTCGT TCGGCCGCTT GAAGTCGCGG 
CCGGTGAAGC CGCGCCAACA GGCCCTGCTC GACACCCTGC TGCCGCAGAT CGCCGTGCCG
ACCGCGCCGT TCCAGCCCCG CGACCTGATG CCGGAAGCCC AGGAAGTCTG GCTGGAGATC
GGCTTTGGCG GCGGCGAGCA CATGGCGGCC CAGGCCGGCA AGCGCCCTGA CGTGCTGATG
ATCGGGGCCG AGCCCTTCGT CAACGGCGTG GCCAGCGCCG TGCGTCACGT CGAGGAGCAG
GCCTTGAAGA ACGTCCGCAT CCACGAGGGC GACGCCCGCG ACGTGGTCGG GTGGCTGCCG
GACGCCAGCA TCGACCGCCT CTTCATCATG TTCCCCGACC CCTGGCACAA GGCGCGGCAC
AACAAGCGCC GCCTGGTCCA GCCGGCGTTC GTGGCCGAGC TGGCGCGGGT GCTGAAACCG
GGCGCGGGCT TCCGCTTCGC CACCGACTGG GCCGACTACG CCCAGTGGAC GGTCGAGCGG
GTGCTGGCCG ATCCGGCCTT CCGGTTCGCC GACGCGGAGG CCGTCCGCAA CGCCCCGCCC
GCCGACCACG TCACCACGCG GTACGAGGAA AAGAAGCTGG GCGACTGCGC GCCGGTGTTC
TTGGACTTCG TCAGGATCTG A
 
Protein sequence
MTHPQQPHGP LRSFGRLKSR PVKPRQQALL DTLLPQIAVP TAPFQPRDLM PEAQEVWLEI 
GFGGGEHMAA QAGKRPDVLM IGAEPFVNGV ASAVRHVEEQ ALKNVRIHEG DARDVVGWLP
DASIDRLFIM FPDPWHKARH NKRRLVQPAF VAELARVLKP GAGFRFATDW ADYAQWTVER
VLADPAFRFA DAEAVRNAPP ADHVTTRYEE KKLGDCAPVF LDFVRI