Gene Caul_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0011 
Symbol 
ID5897723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp18125 
End bp19681 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content70% 
IMG OID641560494 
Productintegral membrane protein MviN 
Protein accessionYP_001681647 
Protein GI167643984 
COG category[R] General function prediction only 
COG ID[COG0728] Uncharacterized membrane protein, putative virulence factor 
TIGRFAM ID[TIGR01695] integral membrane protein MviN 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0453851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATT CCGGCCTGAC CCTGATCAGC CGGTTCATGG GCTTCGCGCG GGATCTGGCG 
GTCTCGTACC GGATGGGGGC CAGCGCCACG CCAGCCGCCG ACGCCTACAA CGCCGCCCTG
GCCTTTCCGA ACCTGTTTCG CCGGTTCTTC GCCGAGGGCG CCTTCGCCGC GGCCTTCGTG
CCGGCCTACG CCAAGTCGCT GCAGCGCGAC GGCGAGGAGG TGGCCGACAT CCTGGCCGCC
GACGCCATGG CCACCCTGGC GGCGGCGACG ATCATCATCA CCGTGATCTG CCAGCTGGCC
ATGCCCTGGC TGATGATGCT GATCAGCCCC GGCTTCGGCT GGGGCACCGA GAAGTACAAG
CTGGCGGTGC TGCTGACCCA GATCACCATG CCCTACCTGC CGTGCATGGC CATCGTCGCC
CACCTGTCGG GGGTGCTGAA CGCCCGCGAC CGCTTCATCC TGTCGGCCGG GGCGCCGATC
CTGCTGAACA TCGCCACCCT GGCCTTCATC CTGCCGCAGA CCACCGCTGT CTCGGCCGCG
ACCTGGGGTT CGGTCGGGGT GGTCGTGGCC GGCGTCGCCC AGGCGTCCCT CCTGGTCTGG
GGCGTCAACA AGTCCGGCGC CAAGGTCCAA TGGCGGCTGC CGCGCCTGAC CCCCGAGGTG
AAGGCCCTGA TCGGCAAGGC CATTCCTGGC GCCCTGGCGG CCAGCGCCAC CCAGGTCAAC
ATCTTCATTT CCGGCAACCT GGCCAGCCAT GTGCCGGGCG GCCGTTCGTG GCTGGCCACC
GCCGACCGCC TGTACCAGCT GCCGCTGGGC CTGGTGGGGG TGGCGATCGG CGTGGCCCTG
CTGCCGCGCC TGTCGCGGGC CGTCAACACG GGCGACGGGC AAGACGCGCA AAGCGCCATG
GACCAGGCCA TCACCCTGGC CATGGCCCTG ACCATTCCCG CCGCCGCCGC CCTGGTGGCC
ATGCCGGGCT TCCTGTCGGA CGCCCTCTAC ACCCGCGGCG AGTTCACGCC GTTCGACGCC
AGCCAGACGG CCTCGGCCCT GTTCTTCTAC GGCCTGGGCA CCCCGGCCTT CGTGCTGCAG
CAGCTCTATT CGCGGGCCTT CTTCGCGCGG GGCGACACCA AGAGCCCGAT GCGCTTCGCC
CTGATCTCGG TGGCGGTCAA TGTCGCGTTC GGCGTGGTCC TGTTCAACCT GATCGGGGTC
AAGGGCATCG CTGCGGCCAC CGCCCTGGCC TCGTGGCTGA ATGTCGGCCA GATGGCCTGG
GGCCTGTCGC GCAAGGACCA CTACAGTCCT TCGTTACAGA CCTGGTCGCG GGTGGCGCGG
ATCCTGGCGG CCAGCCTGGT GATGGGCCTG GTCCTGGCGG CGGCCTCGCA CTGGCGGCCG
ATGATCGAGG CGCCGCTGCG CGAGCTGGGC CTGCGCGGCC ACACCGTGGG CGCCAAGGAG
TTCGCCCTGC TGTTGACCGT GCTGGTCGGG GCGGCGCTGT ATCCGCCGCT GGTTTTCCTG
TTCGGCGGTG TGACGCCGGC GGAACTGAAG GGCGTGCTGC GGCGGGGCAA GGCGTAG
 
Protein sequence
MIYSGLTLIS RFMGFARDLA VSYRMGASAT PAADAYNAAL AFPNLFRRFF AEGAFAAAFV 
PAYAKSLQRD GEEVADILAA DAMATLAAAT IIITVICQLA MPWLMMLISP GFGWGTEKYK
LAVLLTQITM PYLPCMAIVA HLSGVLNARD RFILSAGAPI LLNIATLAFI LPQTTAVSAA
TWGSVGVVVA GVAQASLLVW GVNKSGAKVQ WRLPRLTPEV KALIGKAIPG ALAASATQVN
IFISGNLASH VPGGRSWLAT ADRLYQLPLG LVGVAIGVAL LPRLSRAVNT GDGQDAQSAM
DQAITLAMAL TIPAAAALVA MPGFLSDALY TRGEFTPFDA SQTASALFFY GLGTPAFVLQ
QLYSRAFFAR GDTKSPMRFA LISVAVNVAF GVVLFNLIGV KGIAAATALA SWLNVGQMAW
GLSRKDHYSP SLQTWSRVAR ILAASLVMGL VLAAASHWRP MIEAPLRELG LRGHTVGAKE
FALLLTVLVG AALYPPLVFL FGGVTPAELK GVLRRGKA