Gene Caul_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0002 
Symbol 
ID5897714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2016 
End bp2654 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID641560485 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_001681638 
Protein GI167643975 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID[TIGR00568] DNA alkylation damage repair protein AlkB 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.691503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC CGATCAACGT TCTGCCTGGT TTCGACCTAT GGCCCCAATT GCTGGATCCC 
GGCGCTCAGG CGGATCTGGC GCGCCTGACC CTGGCCGCTC TCGAGGTCGC GCCGCCGGCC
CACTATGAGA CCGCCTACGG CAAGGCGATG AGCGTGGCGA TGAGCAGCTT CGGACCGCTA
GGCTGGACCA GCGACAAGAC CGGCTATCGC TACACAGGCC GCCATCCGGG AACGGGGGCG
CCCTGGCCGG CCATGCCCCA GGCGCTGCTC GATCTGTGGG CGGACCTGGG CGACCCGCAG
ACGCCGCCGG ACGCGGCCCT GATCAACCTC TATCGGGGCG AGGCCCGCAT GGGCCTGCAT
CAGGACCGCG ACGAGGCCGA TCCGCGCTTT CCAGTGCTGT CGATCTCGCT GGGCGACACG
GCGGTGTTCC GGATCGGCGG GACCTCGCGG AAGGGCCCGA CGCGGTCGCT GAAGCTGTCG
TCCGGCGACG TCTGCCGGCT GTCGGGTCCC GCGCGCCTGG CCTTTCACGG GGTGGACCGC
ATCCTGCCAG GGTCGTCGAG TCTGGTGGCG GGGGGAGGGC GGATCAATAT TACCTTGAGA
CGGGCCATGC CTCCCCCCGT GGGGGAGGTG TCGGCGTAG
 
Protein sequence
MIKPINVLPG FDLWPQLLDP GAQADLARLT LAALEVAPPA HYETAYGKAM SVAMSSFGPL 
GWTSDKTGYR YTGRHPGTGA PWPAMPQALL DLWADLGDPQ TPPDAALINL YRGEARMGLH
QDRDEADPRF PVLSISLGDT AVFRIGGTSR KGPTRSLKLS SGDVCRLSGP ARLAFHGVDR
ILPGSSSLVA GGGRINITLR RAMPPPVGEV SA