| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5290 |
|---|
| Symbol | |
|---|
| ID | 5897426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010335 |
|---|
| Strand | - |
|---|
| Start bp | 231571 |
|---|
| End bp | 232713 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641555393 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_001676724 |
|---|
| Protein GI | 167621939 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00731204 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0470255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA GCAACAGCCC ACTGTCCGGC GGCGATGACC CCCGCACACA GCCTGGCCTG
GGCCCGCAAG CCTTCGGCGT CGACGGCGCC TGGCTCGACA GCGCCTATTA CCATCCCATG
AGCCTTGGCG CGGTCGAAGC GGCCACGGGT TATCTGCGCT CGCGCATGGG CGCGGCCGCC
TCTCCGCCCC GAGAGACCCG CGCCATGCAG ACCCGGGTGC GCGCCAAGTT CGCCGCCCTG
ATCGGCGCGC AGGCTTCGGA GATCGCCTTC ACGCCCAGCG CCACCGTCGC TGAGAACTTG
GTCGTCGCCG CCCTACGGCT GGCCGCCGGC TCGCGTGTGG TCACCGATGT GCTCCACTAT
CATGGCTCTC TTCGGCTCTA CGAAGGGCTG CGGGCGCGTG GCGTCGAGGT CGAGGTGCTG
GCGGCGCGCG GCGGCCGGAT CGATCCTGGA GAGTTGGCCG CGGCATTGGT GCGCCGGACT
GATCTTGTGG CGGTTTCGGC GGTCTCGCAG GTCAACGGCT TTGAACATGA TCTGACCGGG
CTTTGCCGCT TGGCGCACGC CAGCGGCGCA TGGGTCTATG CCGACATCAT CCAGGTGGCC
GGGGCCAAGC CCTTCGACGT GCGGGCCAGC GGCGTCGATT TCTGCGGGGC CTCAAGCTAC
AAATGGCTGA TGGGCGACCA GGGTCTGGGG TTTCTCTATG TCCGCGCCGA CCGGTTGGAG
GCGCTGCACC AGCCCCAATT CGGCTCACGT CAGGCCGACC TTCGCCTCAA CGGCGACAAC
CCGACGGCGC AACGCTTCGA GGTCGGCACG ATCAACCTGG CCACGGCCGC GGCCTTGGAC
GTATCGCTGT CGGCCATCCT GAGCCTCACA CCGTCCGTCA TCGCCGAACG GCGGGCCCCG
CTTCTGGCGC GTCTGCGCGA CACCTTGCCC GGGCTGGGTC TGGACCTCCT GACCCCGCCC
GGCTCAAACG GGCCGCTCGT GAGTTTCGGG TCCGCCCGCG CGGCGCGGCT CGTCGAACCG
CTGAACGCGG CCGGCGTTTT CGTCAGCGTC CACCAGGACC GCATTCGGGT CGCCCCGTCG
GTGTTCAACA CCCACGAGGA CCTGGACCGC CTGTTCGCGG TCGTCGCCCA CACCCTGAGC
TGA
|
|---|
| Protein sequence | MTISNSPLSG GDDPRTQPGL GPQAFGVDGA WLDSAYYHPM SLGAVEAATG YLRSRMGAAA
SPPRETRAMQ TRVRAKFAAL IGAQASEIAF TPSATVAENL VVAALRLAAG SRVVTDVLHY
HGSLRLYEGL RARGVEVEVL AARGGRIDPG ELAAALVRRT DLVAVSAVSQ VNGFEHDLTG
LCRLAHASGA WVYADIIQVA GAKPFDVRAS GVDFCGASSY KWLMGDQGLG FLYVRADRLE
ALHQPQFGSR QADLRLNGDN PTAQRFEVGT INLATAAALD VSLSAILSLT PSVIAERRAP
LLARLRDTLP GLGLDLLTPP GSNGPLVSFG SARAARLVEP LNAAGVFVSV HQDRIRVAPS
VFNTHEDLDR LFAVVAHTLS
|
|---|
| |