Gene Caul_5279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5279 
Symbol 
ID5897437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp220676 
End bp221311 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID641555382 
ProductTetR family transcriptional regulator 
Protein accessionYP_001676713 
Protein GI167621928 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00504673 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACTC CATCCGCCTC CCCTCGCAAA CGTCGTCCCC AGGCCGAGCG CAGCGCCGAC 
ATGCGCGCCC GACTGATCCA GGCGGCGATC ACCTGCCTCA ATCGCAACGG CTACAGCGCC
ACCACCGTGA CCAGCGTGGC CGATGAAGCC GGCGCCAGCC GCGGCGCCTT CACCCACCAG
TTTCCGGCCA AGACCGATCT GATGCTGGCG GTCGTGCAGG CTGTGTTTGA AAGCGACTCG
GCGGCCTACA ACCAGACCAT CGAGGCGATG GCGCCGGCCC AGTGGCTGAT GGCGCTGCCC
CAAACCATGT GGGGGGTGAT GAGCCGTCCC TCCGGCATCG CGGTCATGGA AATCATGCTC
GCCTCGCGCT CGGACCCGGA ACTGGCCGAG AAGTTGCGCG CCCAGCAAAA ACTGATCGAC
GAGCGCGCAC ACCAGTGGAG CGCCGAGCGC ATACGCGCCG CGGGGCTGGA TCCCATCCCC
GAGGCCGAAG CGGTGCACGA GCTTTATGTC GCCGCCGTCC GGGGCCTGGC CCTGGAAGCG
GTGTTCATGA ACAACGCCGA CGGCGTCCAG CGATCCCTGC AAGTCCTGAC CGACATGATG
CGCCGCTTCT ATCCGGCCAT CGAAGACAAA CTCTAG
 
Protein sequence
MKTPSASPRK RRPQAERSAD MRARLIQAAI TCLNRNGYSA TTVTSVADEA GASRGAFTHQ 
FPAKTDLMLA VVQAVFESDS AAYNQTIEAM APAQWLMALP QTMWGVMSRP SGIAVMEIML
ASRSDPELAE KLRAQQKLID ERAHQWSAER IRAAGLDPIP EAEAVHELYV AAVRGLALEA
VFMNNADGVQ RSLQVLTDMM RRFYPAIEDK L