Gene Caul_5136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_5136 
Symbol 
ID5897346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010335 
Strand
Start bp56313 
End bp57077 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID641555239 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001676570 
Protein GI167621785 
COG category[R] General function prediction only
[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.708802 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTCA ACGACTCCCT CAAGGGTAAG GTCGCCATCA TCACCGGCGC AGCCCAAGGC 
CTGGGCGAAG CCATCGCTCG CGAATTCGTC GCCCGCGGCG CAGCCGTGAT CATTACAGAC
GTTCAGCGCG AGGAAGGCGA AGCCGTCGCC GCCGATATTC TCGCTCAAGG CGGCAAGGCG
TTGTTCATCG CCCACGACGT CGGCGACGCC GAGGCCTGGG ACGTGGTGGT GGCCAAGGCC
CTGGACACGT TCGGCAAGGT CGACGTCCTG GTCAACAATG CCGGCCTGAT CCAGTTCGCG
CCCCTGGAGG AGATGCCTAT CGAGATGTTC GACCGTGTCA CCAGGGTCAA CGTTCGCGGG
CCTTGGCTCG GCTGCAAGGC GATCTTGCCG GCGCTGAAGG CCGCCGGCGG CGGGGCGATC
ATCAACATGT CGTCGATGAA CGGCATGATC GCTCAGAACC CTGGCCTGAG CGCGTACGCC
ACGTCCAAGG GCGCGGTGCG CATGCTGACC AAGGCCGTCG CCCAGGACTA CGTCCAATAT
GGCGTGCGGG TAAACTCGGT CCACCCGGGC ACCATAGCCT CGACCTTCGT CGCCCCATTC
CTGGAAGATC CCAACTGGCG CGACAAGCTG GTGGGTCGCA CGCCCATGGC GCGGGCCGGC
GAGCCCAGTG AGGTGGCGAA AGTCGTAGCG TTCCTGGCCT CCGACGACGC GTCGTACATG
ACCGGGTCCG AAGTGGCGGT CGACGGCGGC TTCGTATCGT CCTGA
 
Protein sequence
MSVNDSLKGK VAIITGAAQG LGEAIAREFV ARGAAVIITD VQREEGEAVA ADILAQGGKA 
LFIAHDVGDA EAWDVVVAKA LDTFGKVDVL VNNAGLIQFA PLEEMPIEMF DRVTRVNVRG
PWLGCKAILP ALKAAGGGAI INMSSMNGMI AQNPGLSAYA TSKGAVRMLT KAVAQDYVQY
GVRVNSVHPG TIASTFVAPF LEDPNWRDKL VGRTPMARAG EPSEVAKVVA FLASDDASYM
TGSEVAVDGG FVSS