| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5135 |
|---|
| Symbol | |
|---|
| ID | 5897345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010335 |
|---|
| Strand | + |
|---|
| Start bp | 54795 |
|---|
| End bp | 55994 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641555238 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001676569 |
|---|
| Protein GI | 167621784 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.774559 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACCC GTCCGTCCCC GGCGCGAGAC GACGCCGCCC CCCGTCTGGC CAAACCGGTC
GAACGCTGGG CCGCCGTCTT CTCGGTCGCC GTCGCCTCCT TCGCGCTGGT GACCACCGAG
TTTCTGCCGG TGGGCCTGCT CAGCGCGATC GCCCAGGATC TGGGCGTCAG CGTCGGGGCG
GCCGGGTTGA TGATCAGCCT GCCTGGCGCG ACGGCCGCCC TGGCCGCACC GATCCTGACG
GTGCTTAGCC GCACCCTGGA TCGGCGTGTC CTGCTGCTGG CGATGACCGC CTGCTTGATT
GGTGCGGACG TCGTCTCCGC CCTCACCCCC AACTTTGCCT TGATGCTGGC GGCTCGGGCG
GTGCTGGGGG TGGCGATCGG CGGCTTTTGG GCGGTCGGCG CGGCGGTGGG CGGGCGCCTG
GTGGGCGAGA CGCAAGCGGG CCGCGCCACC GCGATTATCT TTTCGGGGAT CTCTCTGGGC
GCCCTGCTCG GCGTGCCGGT GGGCGTCTTC CTGGGGGCGC TTTCCGGTTG GCGCACGGCC
TTTTGGGCGG CCGGAGGGCT CTCTCTGGTC ATCCTGATCG CCCAGGCGGT CTGGCTGCCC
AAGCTGCCGG GCCTGCGCGC GGTGCAGGTC AAGGACCTGT TCGGGATCTT CGCCAATCGC
AACGCCCGCG TGGGCCTGCT GGCAGTGTTT TTCGCGGTGG CCGGCCAGTT TGCGGCCTAT
ACCTTCGTTA ATCCCGTTCT CCTGGACGTT ACGCGCCTGA CGCCCACGGC GCTGAGTCAG
GTGTTCTTCG CCTACGGGGT GGCGGGCTTT TTCGGCAACT TCCTGGGCGG GCATGGCGCG
GGCAAGAACG TTCGCGCCGC CAAGTTCGTG GTGTTGCTGG CCTTGGGCGG CGTCATCATC
GCCTTTGCCC AGTTGGCGGC CCACCCGCCG GCGGCGATCT TGCTGCTGAC GGCCTGGGGA
CTGGTCTGGG GCGGCCTTCC GATCTTGCAC CAGGCCTGGG CTATGCGCGC GTCGCCGGGC
ATGGCCGAAG GCGGATCGGC CCTCTTCGTT TCAGTGTTCC AAGGCTCGAT CGCCATCGGC
TCGGGCTTGG GCGGCGCGGC CGTGGAGACG GTGGGCCTGG TGTGGGGGTT GACCCTGGGC
GGGCTGTCGA TCCTGATCGC GCTCGTGGTT TCGGTGCTCG GGTCCAAGCC TTTCCGCTAG
|
|---|
| Protein sequence | MMTRPSPARD DAAPRLAKPV ERWAAVFSVA VASFALVTTE FLPVGLLSAI AQDLGVSVGA
AGLMISLPGA TAALAAPILT VLSRTLDRRV LLLAMTACLI GADVVSALTP NFALMLAARA
VLGVAIGGFW AVGAAVGGRL VGETQAGRAT AIIFSGISLG ALLGVPVGVF LGALSGWRTA
FWAAGGLSLV ILIAQAVWLP KLPGLRAVQV KDLFGIFANR NARVGLLAVF FAVAGQFAAY
TFVNPVLLDV TRLTPTALSQ VFFAYGVAGF FGNFLGGHGA GKNVRAAKFV VLLALGGVII
AFAQLAAHPP AAILLLTAWG LVWGGLPILH QAWAMRASPG MAEGGSALFV SVFQGSIAIG
SGLGGAAVET VGLVWGLTLG GLSILIALVV SVLGSKPFR
|
|---|
| |