| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_5108 |
|---|
| Symbol | |
|---|
| ID | 5897338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010335 |
|---|
| Strand | - |
|---|
| Start bp | 26403 |
|---|
| End bp | 27353 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641555211 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001676542 |
|---|
| Protein GI | 167621757 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.310256 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCTCG GCGCCGCGCT CCAGGTCAAA GATGAACCTT GGGGCGCGCG TTTGGCGCGG
GAGCCGTCAG GCGGTCGCTG GCGCGAAGTC TTCGAGCCGG ACTACGTCGG CGTCACCGTC
TCCAGCGTGC AGCAAAAGAC CTGGAGCGGG CTGTCGGCGG TCGTACGCGA GCTGCGCGTG
GACGCGCCGT TCGACGTGGA ATGCACCGCC GACTTCTCCC GTCTGCTCGT GGTCCTCGAC
GAGGTGGGCG GACGTATGCG TGGCCGGACC ACCAAGAGCT GCTCGCCTGA TAATCCGCCG
ACCAACGCGA TGTATTTCGT TCCGGCCGGC GCCCAGGTTT GGCAGTGCGC CAATCAGCTG
CGCTACATGC GCCACATCAG TTTGCAGTTT GACGCGGCGT CCCTGGACCA GTTGCTCGGC
GAGGCCGCGC CGGCTCTGCC CGACGGACCC CGAATGGGAT TTTCCGATCC AAGCCTGTTG
GCGATCGCCA GACTGTTCGA GGCTGAATGC CAGAGCGAGC GTCCAGCCGA CCTGTTGTTT
GGAGACGGCC TGTCGCTCAG TCTCTTGTCG GCGCTGGGGC GTCTGGCCCA GGTTCCAAGC
CAGCGGCCCG CTGGACGGGG CGGGTTGACG CCGCGCCATC TCAAGCAGGT CATCGACTAT
ATGGATGCTC ACCTTGGCGA GGCGATCAGT CCCCGTGATC TTGGCGACTT GGTCCACTTC
TCGCCCTCGC ACCTGGGACG GGCCTTCAAG GTCTCGATGG GCGTGTCGCC CTACGCGTGG
CTGATCGAAC GCCGGGTGCG GCGGGCCGCG GAGTTGTTAC TGGATCCGCA GCGCTCCATC
GCCGAGGTCG CTCTGGCGGT CGGGTTCTCC GACCAACCGC ACTTTACGCG CGCCTTTGCG
CGCGTTTTTG GCGCCAGCCC CGGCGCATGG CGCCGCCAGT CCCTGGCCTA G
|
|---|
| Protein sequence | MSLGAALQVK DEPWGARLAR EPSGGRWREV FEPDYVGVTV SSVQQKTWSG LSAVVRELRV
DAPFDVECTA DFSRLLVVLD EVGGRMRGRT TKSCSPDNPP TNAMYFVPAG AQVWQCANQL
RYMRHISLQF DAASLDQLLG EAAPALPDGP RMGFSDPSLL AIARLFEAEC QSERPADLLF
GDGLSLSLLS ALGRLAQVPS QRPAGRGGLT PRHLKQVIDY MDAHLGEAIS PRDLGDLVHF
SPSHLGRAFK VSMGVSPYAW LIERRVRRAA ELLLDPQRSI AEVALAVGFS DQPHFTRAFA
RVFGASPGAW RRQSLA
|
|---|
| |