Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5442 |
Symbol | |
ID | 5873257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 6072643 |
End bp | 6074535 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550578 |
Product | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA |
Protein accession | YP_001671659 |
Protein GI | 167036428 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division |
TIGRFAM ID | [TIGR00136] glucose-inhibited division protein A |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATTTCC CTTCCCGTTT TGAAGTGATC GTCATCGGCG GCGGCCATGC CGGTACCGAG GCTGCGCTTG CGTCTGCACG CATGGGTGTG AAAACCCTGC TGTTGACCCA TAACGTGGAA ACCCTCGGTC ACATGAGCTG CAACCCCGCC ATCGGCGGTA TTGGCAAAAG CCATCTGGTC AAAGAGATCG ATGCCCTAGG CGGCGCCATG GCGCTGGCCA CCGACAAGAG CGGCATCCAG TTCCGCGTTT TGAACAACCG CAAGGGCCCG GCCGTACGCG CCACCCGTGC ACAGGCCGAC CGCGCCATCT ACAAGGCGGT GGTGCGTGAA ATCCTTGAAA ACCAGCCGAA CCTGTGGATA TTCCAGCAGT CCTGCGACGA CCTGATCGTC GAGCAGGACC AGGTCAAAGG TGTGGTGACC CAGATGGGTC TGCGTTTCTT CGCCGAATCG GTGGTATTGA CGACCGGTAC CTTCCTCGGC GGCCTTATCC ACATTGGTCT GCAAAACCAT TCCGGCGGCC GTGCCGGCGA TCCACCCTCG ATCGCCTTGG CCCACCGCAT GCGTGAACTG CCGCTGCGTG TAGGCCGCCT GAAAACCGGG ACCCCGCCAC GCATCGACGG CCGCTCGGTG GACTTCTCGG TGATGACCGA GCAGCCAGGC GATACACCGA TCCCGGTGAT GTCGTTCATG GGCAATGCCG AAATGCATCC CCGTCAGGTG AGCTGCTGGA TTACCCACAC CAATGCACGC ACCCACGAGA TCATCGCGTC GAACCTCGAC CGTTCGCCGA TGTACTCGGG TGTGATCGAA GGTGTCGGCC CGCGTTATTG CCCATCGATC GAAGACAAGA TTCACCGCTT CGCCGACAAG GACAGCCACC AGGTGTTCAT CGAGCCGGAA GGCCTGACCA CCCATGAGCT GTACCCCAAC GGTATTTCCA CGTCGCTGCC GTTCGACGTG CAACTGGAGC TGGTGCGTTC GATCCGCGGT ATGGAAAACG CCCACATCGT GCGCCCTGGC TATGCCATCG AGTACGACTA CTTCGACCCG CGTGACCTGA AGTACAGCCT TGAGACCAAA GTCATCGGCG GCCTGTTCTT CGCCGGGCAG ATCAACGGCA CCACCGGTTA CGAAGAAGCC GGTGCCCAAG GCCTGCTGGC CGGGACCAAC GCCGCACTGC GTGCGCAGGG CCGCGACAGC TGGTGCCCGC GCCGCGACGA GGCGTACATC GGTGTACTGG TCGACGACCT GATTACCCTG GGTACCCAGG AGCCGTACCG CATGTTCACC TCGCGTGCCG AGTACCGCCT GATCCTGCGC GAAGACAACG CCGACTTGCG CTTGACCGAA AAAGGCCGTG AACTTGGCCT GATCGATGAC CAGCGCTGGG CTGCTTTCTG CGCCAAGCGC GACGGCATCG AGCGTGAGGA ACAGCGCCTG AAGTCGACCT GGGTACGCCC GAACACCGAG CAAGGCCAGG CCATTGTGGA TAAGTTCGGT ACCCCGCTCA GCCACGAATA CAGCCTGCTC AACCTGCTCG CTCGCCCAGA AATCGACTAC GCTGGCCTGA TCGAGGCGAC TGGCGGTGAA GCAATCGATC CACAGGTCGC CGAGCAGGTC GAAATCCGTA CCAAGTACGC TGGCTACATC GACCGCCAGC AAGATGAGAT CGCCCGCCTG CGCGCCAGCG AAGACACGCG CCTGCCTGTG GATATCGACT ACTCGACCAT TTCCGGCCTG TCCAAGGAGA TCCAGGGCAA ACTGGGACAA ACCCGCCCAG AAACCCTGGG CCAGGCTTCG CGCATCCCGG GCGTGACCCC GGCGGCGATT TCCCTGTTGC TGATTCACTT GAAAAAACGC GGCGCTGGCC GCGAATTGGA GCAAAGCGCT TGA
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Protein sequence | MDFPSRFEVI VIGGGHAGTE AALASARMGV KTLLLTHNVE TLGHMSCNPA IGGIGKSHLV KEIDALGGAM ALATDKSGIQ FRVLNNRKGP AVRATRAQAD RAIYKAVVRE ILENQPNLWI FQQSCDDLIV EQDQVKGVVT QMGLRFFAES VVLTTGTFLG GLIHIGLQNH SGGRAGDPPS IALAHRMREL PLRVGRLKTG TPPRIDGRSV DFSVMTEQPG DTPIPVMSFM GNAEMHPRQV SCWITHTNAR THEIIASNLD RSPMYSGVIE GVGPRYCPSI EDKIHRFADK DSHQVFIEPE GLTTHELYPN GISTSLPFDV QLELVRSIRG MENAHIVRPG YAIEYDYFDP RDLKYSLETK VIGGLFFAGQ INGTTGYEEA GAQGLLAGTN AALRAQGRDS WCPRRDEAYI GVLVDDLITL GTQEPYRMFT SRAEYRLILR EDNADLRLTE KGRELGLIDD QRWAAFCAKR DGIEREEQRL KSTWVRPNTE QGQAIVDKFG TPLSHEYSLL NLLARPEIDY AGLIEATGGE AIDPQVAEQV EIRTKYAGYI DRQQDEIARL RASEDTRLPV DIDYSTISGL SKEIQGKLGQ TRPETLGQAS RIPGVTPAAI SLLLIHLKKR GAGRELEQSA
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