| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5430 |
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| Symbol | atpC |
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| ID | 5873245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6063041 |
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| End bp | 6063460 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641550566 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_001671647 |
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| Protein GI | 167036416 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTATGA CAGTCCATTG CGATATCGTC AGCGCGGAAG GAGAGATTTT CTCCGGCCTG
GTCGAGATGG TAGTAGCGCA CGGTAACCTG GGTGATCTTG GTATCGCTCC GGGCCACGCG
CCGCTGATCA CCAATCTCAA GCCTGGTCCG ATCACGCTGA CCAAGCAGGG TGGCACCCAA
GAGGTGTTCT ACATCTCTGG TGGCTTCCTC GAGGTTCAGC CGAACATGGT CAAGGTGCTT
GCCGATACCG TGCAACGTGC TGCAGACCTG GATGAAGCGC AAGCTCAGGA AGCCCTCAAG
GCTGCCGAGA ACGCCCTGAA TCTGAAAGGC GCGGACTTCG ACTACGGTGC CGCCGCCGCA
CGTCTGGCCG AGGCCGCAGC CCAGCTGCGT ACCGTTCAGC AAATGCGCAA AGGCAAGTAA
|
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| Protein sequence | MAMTVHCDIV SAEGEIFSGL VEMVVAHGNL GDLGIAPGHA PLITNLKPGP ITLTKQGGTQ
EVFYISGGFL EVQPNMVKVL ADTVQRAADL DEAQAQEALK AAENALNLKG ADFDYGAAAA
RLAEAAAQLR TVQQMRKGK
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