| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5418 |
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| Symbol | |
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| ID | 5873233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6048507 |
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| End bp | 6049397 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641550554 |
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| Product | glutamate racemase |
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| Protein accession | YP_001671635 |
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| Protein GI | 167036404 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0796] Glutamate racemase |
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| TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.393373 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATCC TCAATAGTTC ACTGGCGATT GCCTTCAGCT TTTGGCTGGA TGACGAAAAT
AAACTATATA GCAGTCAATG GTTGAGTGCG AAGCGGCCAA TTGTAGTATT GGATTCTGGC
GTAGGGGGGC TAACACTGTC CCGGCAACTG GAACTTCTAC TTCCTGAGGC AAGTATACTC
TATGTGGTAG ATAATGAATG GTTCCCGTAC GGTAGCAAGT CCGGGGCTGA AATTTCTCAA
AGGGTACAGC ATTTAATTGA TCAGCTCTAT ACACAAATTA GGCCGTTAGC TATCGTTGTA
GCGTGTAATA CCGCTTCCGT CGCTATGAAG GACTATGGTC TAGACTCATG TGTTCAGCAC
TGTTTCTTAA TAACGCCCCC CCTAGAGGAA GCTGTTGAAA TTTCCGACCA AAAAAATATC
GTATTACTTG CCACTCCCGG CACGGTTAAG AGTAGGTATA TTCGCCGCGC GATGGCCATA
ACAAGAAATC GGGCCAATAT ATGGCCAATA GCGGCGCAGC CGTTGGTAGC ACTGTCTGAA
GCCCGATTGG CAGGGCAGGT AGCAAGTTTT GCTAGTTTCA CTAAGCTTGT GGATGACCAT
CTCACTACAA AACAGCGATT TTCAATTGAC ACAGTTATCC TTGGTTGCAC TCACTTCCCT
CATGTAATTA AAGACTTGGA AGGGATATTC CCATCCGTTC AGAATTGGCT CGACCCTGCA
AAAAAAGTTG CTCTGCGGGT CGCATCTACA GTGAAAAAAA AGCACGCTTC CATTAGCCAG
CCTTTAAAAG CTGTTATCTT TACAAGTAAG CAAGATATTA TTGGCTATCG CAAGGTGTTT
TCGAAAAATG GCTTCTGCAC AGACATCAAA ACCTTGACCG CTAATTTTTG A
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| Protein sequence | MHILNSSLAI AFSFWLDDEN KLYSSQWLSA KRPIVVLDSG VGGLTLSRQL ELLLPEASIL
YVVDNEWFPY GSKSGAEISQ RVQHLIDQLY TQIRPLAIVV ACNTASVAMK DYGLDSCVQH
CFLITPPLEE AVEISDQKNI VLLATPGTVK SRYIRRAMAI TRNRANIWPI AAQPLVALSE
ARLAGQVASF ASFTKLVDDH LTTKQRFSID TVILGCTHFP HVIKDLEGIF PSVQNWLDPA
KKVALRVAST VKKKHASISQ PLKAVIFTSK QDIIGYRKVF SKNGFCTDIK TLTANF
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