Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5416 |
Symbol | |
ID | 5873231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 6045373 |
End bp | 6046773 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550552 |
Product | dihydrolipoamide dehydrogenase |
Protein accession | YP_001671633 |
Protein GI | 167036402 |
COG category | [C] Energy production and conversion |
COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.813696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.542415 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCTT ATGACGTGGT GATCATCGGC GGTGGCCCTG GCGGCTACAA CGCCGCCATC CGCGCTGGCC AGCTGGGCCT TAGCGTCGCC TGCGTGGAAG GCCGCTCGAC CTTGGGCGGC ACCTGCCTGA ACGTTGGTTG CATGCCTTCC AAGGCACTGC TGCATGCTTC CGAGCTTTAC GAAGCCGCCA GCGGTGACGA ATTCGCCCAC CTCGGTATCG AAGTCAAGCC CACCCTCAAC CTCGCCCAGA TGATGAAACA AAAGGATGAG AGCGTGACCG GCCTGACAAA GGGCATCGAG TACCTGTTCC GCAAGAACAA AGTCGACTGG ATCAAAGGCT GGGGGCGCCT GGATGGCGTG GGCAAGGTCG TGGTCAAGGC CGAAGACGGC AGCGAAACTG CGCTGCAGGC CAAGGACATC GTCATCGCCA CCGGCTCCGA GCCAACCCCC CTGCCAGGCG TGACTATCGA CAACCAGCGC ATCATCGACT CGACCGGTGC GCTGTCGCTG CCGCAAGTGC CCAAGCACCT GGTCGTCATC GGTGCCGGCG TAATCGGCCT TGAGCTGGGT TCGGTCTGGC GCCGGCTGGG TAGCCAGGTC ACCGTCATCG AATACCTCGA CCGCATCTGC CCAGGCACCG ACACGGAAAC CGCCAAGACC CTGCAGAAGG CACTGGCCAA GCAAGGCATG GTGTTCAAGC TGGGCAGTAA AGTGACCCAG GCTACTGCAA GTGCCGATGG CGTGAGCCTG ACGCTGGAGC CTGCCGCTGG CGGCACCGCA GAATCGCTGC AGGCCGATTA CGTGCTGGTG GCTATCGGCC GCCGCCCTTA TACCAAAGGG CTGAACCTTG AAAGCGTGGG CCTGGAAACC GACAAGCGTG GCATGCTCGG TAACGAGCAC CACCGCACTT CAGTGCCAGG TGTGTGGGTG ATTGGCGACG TCACGTCCGG CCCGATGCTG GCGCACAAGG CCGAAGACGA AGCGGTAGCC TGCATCGAGC GCATCGCCGG CAAGCCCCAC GAGGTCAACT ACAACCTCAT CCCTGGCGTA ATCTACACCC GCCCGGAGCT GGCCACCGTG GGCAAGACCG AGGAGCAGCT CAAAGCAGAA GGACGCGCCT ACAAGGTCGG CAAGTTCCCC TTCACCGCCA ACAGCCGGGC CAAGATCAAC CACGAGACCG AAGGCTTCGC CAAGGTCATC GCCGATGCCC AAACCGATGA AGTACTGGGC GTACACCTGG TAGGGCCAAG CGTCAGTGAA ATGATTGGTG AGTTCTGCGT GGCCATGGAG TTCTCGGCCT CGGCAGAAGA CATCGCCCTC ACCTGCCACC CGCACCCGAC GCGCTCCGAG GCCCTGCGCC AGGCAGCGAT GAATGTGGAC GGCATGGCGA TGCAGATCTG A
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Protein sequence | MKSYDVVIIG GGPGGYNAAI RAGQLGLSVA CVEGRSTLGG TCLNVGCMPS KALLHASELY EAASGDEFAH LGIEVKPTLN LAQMMKQKDE SVTGLTKGIE YLFRKNKVDW IKGWGRLDGV GKVVVKAEDG SETALQAKDI VIATGSEPTP LPGVTIDNQR IIDSTGALSL PQVPKHLVVI GAGVIGLELG SVWRRLGSQV TVIEYLDRIC PGTDTETAKT LQKALAKQGM VFKLGSKVTQ ATASADGVSL TLEPAAGGTA ESLQADYVLV AIGRRPYTKG LNLESVGLET DKRGMLGNEH HRTSVPGVWV IGDVTSGPML AHKAEDEAVA CIERIAGKPH EVNYNLIPGV IYTRPELATV GKTEEQLKAE GRAYKVGKFP FTANSRAKIN HETEGFAKVI ADAQTDEVLG VHLVGPSVSE MIGEFCVAME FSASAEDIAL TCHPHPTRSE ALRQAAMNVD GMAMQI
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