| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5396 |
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| Symbol | |
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| ID | 5873211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6024260 |
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| End bp | 6025675 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641550532 |
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| Product | pyruvate carboxylase subunit A |
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| Protein accession | YP_001671613 |
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| Protein GI | 167036382 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0439] Biotin carboxylase |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00770479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGATAAAAA AAATCCTGAT CGCCAACCGA GGTGAAATCG CAGTTCGGAT CGTGCGTGCC
TGCGCCGAGA TGGGCATACG CTCGGTAGCG ATCTTTTCCG ACGCCGACCG GCATGCCTTG
CACGTCAAGC GCGCCGACGA AGCCCACAGC ATTGGTGCCG AGCCGCTGGC CGGCTACCTG
AACCCGCGCA AGCTGGTGAA CCTGGCTGTG GAAACCGGTT GTGATGCCCT GCACCCGGGC
TATGGTTTTT TGTCGGAAAA CGCTGAACTG GCAGAGATCT GCGCCGAGCG CGGGATCAAG
TTCATCGGCC CGGCCGCCGA CGTGATTCGC CGCATGGGCG ACAAGACCGA AGCGCGCCGC
ACCATGATCG CCGCTGGTGT GCCGGTCACC CCTGGCACCG AAGGCAACGT TGCCGATATT
CATGAAGCCT TGAGCGAAGG CGAGCGCATC GGTTACCCGG TGATGCTCAA GGCCACCTCC
GGTGGTGGCG GTCGCGGTAT TCGCCGTTGC AACAGCCGCG AAGAACTGGA ACAGAACTTC
CCACGGGTGA TTTCCGAGGC GACCAAGGCC TTTGGTTCGG CTGAAGTGTT CCTGGAAAAG
TGCATCGTCA ACCCCAAGCA CATCGAGGCG CAGATCCTCG GTGACAGCTT TGGCAACGTG
GTGCACCTGT TCGAGCGCGA CTGCTCGATC CAGCGCCGTA ACCAGAAACT CATCGAAATC
GCCCCAAGCC CCCAGCTCAC CCCCGAGCAG CGCGCCTACA TTGGCGACCT GGCAGTGCGT
GCGGCCAAGG CGGTGAACTA CGAGAACGCC GGTACCGTGG AGTTTCTGCT CGCCGATGGC
GAGGTGTACT TCATGGAAAT GAACACCCGG GTGCAGGTGG AACACACCAT CACCGAGGAA
ATCACCGGTA TCGACATCGT CCGTGAGCAG ATTCGCATTG CCTCGGGCTT GCCGCTGTCG
GTCAAGCAAG AAGACATTCA GCACCGCGGT TACGCGTTGC AGTTCCGTAT CAACGCCGAA
GACCCGAAGA ACAACTTCCT GCCAAGTTTC GGCAAGATCA CCCGTTACTA CGCCCCCGGC
GGCCCCGGCG TGCGTACCGA CACGGCGATC TACACCGGCT ACACCATTCC GCCGTTCTAC
GACTCCATGT GCCTGAAACT GGTGGTGTGG GCGTTGACCT GGGAAGAAGC CATGGACCGC
GGCCTGCGGG CCCTGGACGA CATGCGCGTG CAAGGGGTGA AGACCACCGC CGCGTACTAC
CAGGAAATCC TGCGCAATCC GGAATTCCGT AGCGGCCAGT TCAATACCAG CTTCGTCGAA
AGCCACCCTG AACTGACCAA CTACTCGATC AAGCGCAAAC CCGAAGAGCT GGCCCTGGCC
ATCGCCGCCG CCATCGCCGC CCACGCAGGC CTGTGA
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| Protein sequence | MIKKILIANR GEIAVRIVRA CAEMGIRSVA IFSDADRHAL HVKRADEAHS IGAEPLAGYL
NPRKLVNLAV ETGCDALHPG YGFLSENAEL AEICAERGIK FIGPAADVIR RMGDKTEARR
TMIAAGVPVT PGTEGNVADI HEALSEGERI GYPVMLKATS GGGGRGIRRC NSREELEQNF
PRVISEATKA FGSAEVFLEK CIVNPKHIEA QILGDSFGNV VHLFERDCSI QRRNQKLIEI
APSPQLTPEQ RAYIGDLAVR AAKAVNYENA GTVEFLLADG EVYFMEMNTR VQVEHTITEE
ITGIDIVREQ IRIASGLPLS VKQEDIQHRG YALQFRINAE DPKNNFLPSF GKITRYYAPG
GPGVRTDTAI YTGYTIPPFY DSMCLKLVVW ALTWEEAMDR GLRALDDMRV QGVKTTAAYY
QEILRNPEFR SGQFNTSFVE SHPELTNYSI KRKPEELALA IAAAIAAHAG L
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