| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5395 |
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| Symbol | |
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| ID | 5873210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6022440 |
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| End bp | 6024248 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550531 |
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| Product | pyruvate carboxylase subunit B |
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| Protein accession | YP_001671612 |
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| Protein GI | 167036381 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0145041 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA AAATTCACGT AACCGACACG ATCCTGCGCG ACGCCCACCA GTCCCTGCTG
GCCACCCGCA TGCGTACCGA AGACATGCTG CCGATCTGCG ACAAGCTCGA CAAAGTCGGC
TACTGGTCGC TGGAAGTCTG GGGTGGCGCC ACCTTCGACG CCTGCGTGCG CTTCCTCAAG
GAAGACCCGT GGGAGCGCCT GCGCAAGCTG CGTGCAGCAC TGCCCAATAC TCGCCTGCAA
ATGCTGCTGC GCGGCCAAAA CCTGCTGGGC TACCGCCACT ACAGCGACGA CGTGGTCAAA
GCTTTCGTCG CCAAGGCTGC GGTCAACGGC ATCGATGTTT TCCGTATTTT CGACGCCATG
AACGACGTGC GTAACCTGCG CGTGGCCATC GAAGCGGTCA AGGCCGCCGG CAAGCACGCC
CAGGGCACCA TCGCCTACAC CACCAGCCCG GTGCACACCA TCGAAGCCTT CGTGAACCAA
GCCAAGCAGA TGGAAGCCAT GGGTTGCGAC TCGGTAGCGA TCAAGGACAT GGCCGGCCTG
CTGACCCCAT TCGCCACTGG CGAGCTGGTC AAGGCGCTGA AGGCCGAGCA GTCGCTGCCG
GTGTTCATCC ACTCCCACGA CACCGCCGGC CTGGCGGCCA TGTGCCAGCT CAAGGCTGTG
GAAAACGGTG CAGACCACAT CGACACCGCC ATTTCCAGCT TCGCCTGGGG CACCAGCCAC
CCGGGTACCG AGTCGATGGT TGCCGCGCTC AAGGGCAGTG AGTTCGATAC CGGCCTGGAC
CTGGAACTGC TGCAGGAAAT CGGCCTGTAC TTCTACGCCG TGCGCAAGAA GTACCACCAG
TTCGAAAGCG AGTTCACCGC CGTGGACACC CGCGTGCAGG TCAACCAGGT GCCGGGCGGC
ATGATTTCCA ACCTGGCCAA CCAGTTGAAA GAGCAGGGCG CGCTCAACCG CATGAACGAA
GTGCTGGCTG AGATCCCACG TGTGCGTGAA GACCTTGGTT ACCCGCCGCT GGTAACGCCG
ACCTCGCAGA TCGTCGGCAC CCAGGCGTTC TTCAACGTGC TGGCCGGCGA GCGCTACAAG
ACCATCACCA ACGAGGTGAA GCTGTACCTG CAAGGCGGTT ACGGCAAGGC GCCAGGTGTG
GTCAACGAGC AACTGCGCCG CCAGGCGATC GGTAGCGAAG AAGTGATCGA CGTGCGCCCG
GCCGACCTGC TGAAGCCGGA GATGGCCAAG CTGCGTACCG ACATCGGCGC CCTGGCCCGC
TGTGAAGAGG ACGTGCTGAC CTTTGCCATG TTCCCGGACA TTGGCCGCAA GTTCCTCGAA
GAACGCGAAG CCGGCACGCT CACCCCGGAA GCCCTGCTGC CGATTCCAGA AGCTGGCGCC
GTTTCTGCCC CTGGCGGTGA AGGCGTGCCG ACCGAGTTCG TCATCGACGT GCACGGCGAA
ACCTACCGCG TCGACATCAC GGGTGTGGGT GTGAAGGCCG AAGGCAAGCG CCACTTCTAC
CTGTCCATCG ACGGCATGCC GGAAGAAGTG GTGTTCGAAC CACTCAACGA ATTCGTCGGC
GGCGGCGGCA GCAAACGCAA GCAAGCCACC GACCCAGGCC ACGTCAGCAC CACCATGCCA
GGCAACATCG TCGATGTGCT GGTCAAGGAA GGTGACGTGG TCAAGGCCGG TCAGGCCGTG
CTGATCACCG AAGCCATGAA GATGGAGACC GAAGTGCAGG CGGCCATCGC CGGCAAGGTC
GTCGCCATCC ATGTGGCCAA GGGCGATCGC GTGACGCCGG GTGAAATCCT GATCGAGATC
GAGGGCTGA
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| Protein sequence | MSKKIHVTDT ILRDAHQSLL ATRMRTEDML PICDKLDKVG YWSLEVWGGA TFDACVRFLK
EDPWERLRKL RAALPNTRLQ MLLRGQNLLG YRHYSDDVVK AFVAKAAVNG IDVFRIFDAM
NDVRNLRVAI EAVKAAGKHA QGTIAYTTSP VHTIEAFVNQ AKQMEAMGCD SVAIKDMAGL
LTPFATGELV KALKAEQSLP VFIHSHDTAG LAAMCQLKAV ENGADHIDTA ISSFAWGTSH
PGTESMVAAL KGSEFDTGLD LELLQEIGLY FYAVRKKYHQ FESEFTAVDT RVQVNQVPGG
MISNLANQLK EQGALNRMNE VLAEIPRVRE DLGYPPLVTP TSQIVGTQAF FNVLAGERYK
TITNEVKLYL QGGYGKAPGV VNEQLRRQAI GSEEVIDVRP ADLLKPEMAK LRTDIGALAR
CEEDVLTFAM FPDIGRKFLE EREAGTLTPE ALLPIPEAGA VSAPGGEGVP TEFVIDVHGE
TYRVDITGVG VKAEGKRHFY LSIDGMPEEV VFEPLNEFVG GGGSKRKQAT DPGHVSTTMP
GNIVDVLVKE GDVVKAGQAV LITEAMKMET EVQAAIAGKV VAIHVAKGDR VTPGEILIEI
EG
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