| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5389 |
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| Symbol | |
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| ID | 5873204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 6016771 |
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| End bp | 6017814 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550525 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001671606 |
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| Protein GI | 167036375 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.382979 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0522002 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACGA TCTATTCCGA TGACCACCGC CTGCACCACG GCCGCTGCGA GCTGATCGAC
GGCAAGCTGA TGCCCTGCTT CGAAATGCCT TCGCGTGCAG ACCATGTGCT CGACCAGGTA
AAAAAGCGCA ACCTCGGCGA TATCCAAGGC CCTACCGATT TCGGCCGCGC GCCGTTGCTT
CGCATCCACA GCGCCGACTA CCTGAACTTC TTCGAGGGCG CCTGGGCCCG CTGGGCCGCA
TTGGGCCATG AGGGCGACCT GCTACCCTTC ACCTGGCCTG CACGCACCCT GCGCCAGGTA
AAACCCACTG GCCTGCACGG TGAGCTGGGC TACTACAGTT TCGATGCCGG TGCACCGATC
ACCGCCGGCA CTTGGCAAGC GGCCTACAGC GCCGCCCAGG TCGCCCTTAC CGCCCAGGCA
GCGATCCAAC AAGGTGCCCA TTCGGCCTTC GCGCTGTGCC GTCCGCCAGG GCACCACGCC
GCTGGCGAAG TGATGGGTGG CTACTGCTAC CTCAACAACG CCGCCATCGC CGCTCAGGCC
TTCCTCGACC AAGGCCGGCG CAAGGTTGCC ATCCTCGACG TCGACTACCA CCACGGCAAC
GGAACCCAGG ACATCTTCTA CAGCCGCGAT GATGTGTTCT TTGCCTCGAT CCACGGCGAC
CCGCAGGATG AATTCCCGTT CTTCCTCGGC TATGCCGATG AAACCGGCGA AGGCGCCGGC
GAGGGCTGCA ACATCAACTA CCCCTTGCCG GCCGGTAGCG ACTGGGCTGC CTGGAGTGCC
GCCCTGGAAG ACGCCTGCCA GCGCATCGCC CGCTATGACG CCGACGTACT GGTGATCTCC
CTGGGTGTGG ACACCTTCAA GGATGACCCC ATCTCGCAGT TCAAGTTGGA CAGCCCGGAC
TACCTGGAGA TGGGCCAGCG CATCGGCCAG CTGGGCAAGC CGACCTTGTT CGTGATGGAA
GGCGGCTACG CTGTGGAAGA AATCGGTATC AACGCGGTCA ATGTGCTGGA AGGCTTCCAG
CGCGCCCAGC CAGGAGCCCG GTAA
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| Protein sequence | MLTIYSDDHR LHHGRCELID GKLMPCFEMP SRADHVLDQV KKRNLGDIQG PTDFGRAPLL
RIHSADYLNF FEGAWARWAA LGHEGDLLPF TWPARTLRQV KPTGLHGELG YYSFDAGAPI
TAGTWQAAYS AAQVALTAQA AIQQGAHSAF ALCRPPGHHA AGEVMGGYCY LNNAAIAAQA
FLDQGRRKVA ILDVDYHHGN GTQDIFYSRD DVFFASIHGD PQDEFPFFLG YADETGEGAG
EGCNINYPLP AGSDWAAWSA ALEDACQRIA RYDADVLVIS LGVDTFKDDP ISQFKLDSPD
YLEMGQRIGQ LGKPTLFVME GGYAVEEIGI NAVNVLEGFQ RAQPGAR
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