| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5379 |
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| Symbol | |
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| ID | 5873194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6007172 |
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| End bp | 6008461 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550515 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001671596 |
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| Protein GI | 167036365 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.40701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCG TGCCGAGCAG TATCGAGCAG CCCTCGCGGC CGCTGACCCG CAGTGACTAC
AAGACCCTCT CACTGTCCGC CCTGGGCGGC GCGCTGGAGT TCTACGACTT CATTATTTTC
GTGTTCTTCG CCACGGTGGT GGGCAAGTTG TTCTTCCCGG CCGACATGCC GGAGTGGCTG
CGCCTGATGC AAACGTTCGG CATCTTCGCC GCTGGCTACC TGGCGCGGCC GTTGGGCGGC
ATCATCATGG CCCATTTCGG CGACCTGCTC GGGCGCAAGA AGATGTTCAC CCTGAGCATT
TTCATGATGG CCGTGCCGAC CCTGATCATG GGCCTGCTGC CGACGTATGC ACAAATCGGC
ATGTGGGCAC CTATCCTGCT GTTGCTGATG CGCGTGATCC AAGGCGCGGC GATCGGCGGC
GAGGTGCCGG GTGCCTGGGT GTTCGTCTCC GAGCATGTGC CAGCGCGCAA CACTGGCTAC
GCCTGCGGTA CCCTGACGGC AGGCCTGACC GCCGGCATTC TGCTTGGCTC GCTGGTAGCG
ACACTGATCA ACAGTGTGTA CAGCGTGGAA GAAGTGGCCG ATTACGCCTG GCGTATCCCG
TTCCTGCTGG GTGGCGTGTT CGGCCTGTTC TCGGTCTACC TGCGCCGCTG GCTGCACGAA
ACCCCGGTGT TCGCCGAAAT GCAGCAACGT AAGGCACTGG CCGAGGAGCT GCCACTGCGC
GCCGTGCTGC GTGACCACCG TGGCCCGATC ATCCTGTCGA TGTTGCTGAC CTGGATGCTG
TCGGCCGGGA TCGTGGTGGT CATCCTGATG ACCCCGGCGC TGCTGCAGAG CTTCTACCAC
ATCAGCCCGA CCGACTCGCT CAAGGCCAAC AGCCTGGCCA TTGTATTGCT TAGCTTTGGC
TGCATCGGCG CCGGCAGCCT GGCCGACCGC TTTGGTGCGG GCCGGGTGTT CGTGATCGGC
AGCCTGCTGC TGCTGGCCAG CTCCTGGACC TTCTACCACA GCCTGCCAAC CCGGCCCGAG
CTGCTGTTCC CGCTGTATGC CGTGACCGGC CTGTGCGTGG GCGTGATTGG CGCGGTGCCT
TATGTAATGG TCAAGGCATT CCCGGCGGCG GTGCGCTTCA GCGGGCTGTC GTTCTCGTAC
AACGTGGCCT ACGCGATCTT CGGCGGTTTG ACGCCGATGG TGGTGACCGC GCTGCTGAAG
GTGAGCCCGA TGGCGCCTGC CTACTATGTG GCAGGCTTGT GCGCCGTTGG TCTGGCTGTG
GGGCTGTACC TGCTCGCCAA CAAGCGCTGA
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| Protein sequence | MTSVPSSIEQ PSRPLTRSDY KTLSLSALGG ALEFYDFIIF VFFATVVGKL FFPADMPEWL
RLMQTFGIFA AGYLARPLGG IIMAHFGDLL GRKKMFTLSI FMMAVPTLIM GLLPTYAQIG
MWAPILLLLM RVIQGAAIGG EVPGAWVFVS EHVPARNTGY ACGTLTAGLT AGILLGSLVA
TLINSVYSVE EVADYAWRIP FLLGGVFGLF SVYLRRWLHE TPVFAEMQQR KALAEELPLR
AVLRDHRGPI ILSMLLTWML SAGIVVVILM TPALLQSFYH ISPTDSLKAN SLAIVLLSFG
CIGAGSLADR FGAGRVFVIG SLLLLASSWT FYHSLPTRPE LLFPLYAVTG LCVGVIGAVP
YVMVKAFPAA VRFSGLSFSY NVAYAIFGGL TPMVVTALLK VSPMAPAYYV AGLCAVGLAV
GLYLLANKR
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