| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5378 |
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| Symbol | |
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| ID | 5873193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 6004456 |
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| End bp | 6007044 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641550514 |
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| Product | S-type pyocin domain-containing protein |
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| Protein accession | YP_001671595 |
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| Protein GI | 167036364 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.454504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCAAA ACACACTTCA TGACAGCTCC ACGGGTGATG TTGTCATCAC CCCTGGCTCC
TCAGGTTCCA GTAGCGGCGG GGGCGGCTTC TTCAGCATTG GCGGCGGCGG TGGCTTCGGT
GGTGGCTTTG GCGGTTCCAG CCGACGTCGC AAGAAGAAGC GTGCCAGAGC GCGTGCTGCT
GCCTTGGCGC AAGCAAGAGC CCAGGAGCAG GCTCGCCAAG CGGCAGCCGC AAGGGCTCAT
GCCGAAATGC TGGCTGCATT ACATAGGCAG CAAGTGGAGG CTCATAGCCA GGCACGTGAA
GTTCGGCGCG TGCAGCTTGA TGCGCATTTC GCTGGCCAGG CGCAAGGCTT GGCACAGGCG
CTACAGCAGG AGATCAACGC AGCGCGCAAA CGCCCGGAAT ACGACGGCAG TGAGCGTTGG
CAGCTTTACC AGATCACCAA AGCGCAAAAC GAAACCAAAG GGCTTATAGC CGCCAAGCAG
CTTGAGTTGG CGAATCGGCA GGCGTTGGCC GGGGCTTTTG CTGGCCATGA TGCTGATGCA
GGTACATACG CCGCCCGACT GGCCGGGCTG GCGACCGCGC AACACATGCA GCAACTGCAT
CAGGGCTGGG AAACAGCGTA CGTAGCGGCC TCAGAGGCTC GTTTGCTGCA GGAGGCAATT
GCCCAGCTGT CGCAGCGCTC AGCCGAGCTG GCTGTAGAAC ATGCCCAACA GGAACAGCTC
TGGCGCGCCA GGGAGGCGGA ATGGGAGCGT CAGCGGCAAT ACGCTGAGCT GCGCGAATCC
AGAATTCGCT ACAAGCAGCA GGTTGACGAA GACCGGCGCC TTGTTCGGCT GAAGGAGGCC
GCCACGCTGA CCGTGCCAGT AGCGGCTGCG TCGGCTGGGG GCGTGTTGCT TGGTCAGGCA
GGCGCGCAGG TTGCGGCTGA GCTGGCAACG GCTATCGAGC AGGCGATTGC TAGCGCGGCC
AAGGAAGTGC TGAGGGTTGC AGCTATCCGC CTTGGTCAGG CGGTCGGTCT CTCGGCCACG
GCCATGCTGT ATTCGCCGGC GCTGGGGAAT GGCGAACTGA CCGAAGCCCA GCGCAGGCGT
CACTTCGAAG GTTTGGGCAT ACATGCAGAC CTGCTGGGCA TTGCGCCAGG GCAGGATCTT
CAGGCTATCG CCGATGCGGG TGGGTCGGCC CGTCTGGGTC AGCGCATCAA GATCGAGCAT
CTTCCAGGTG GCAGTGCGAT AGCGGTGGCC GCCACAGGCG CCGGAATCGC CCCGGAGGTC
CGGGTCAGGA ATGCCGTTTA CGACCCCGTC ACCGATACCT ACCGAGTCGA GGCACAGACG
CCCGACGGGA AAACCATCGT TCTGGGTAAC GCTACCCCGG TGGCGGAAAG CCCGTCCAAC
GGCCGGATGC TCGCGCTTGA GCCACAAGCT GCAGAGGTTG GCGCTGGCGT GGACCTTCGC
TTCGATGACT GCATCGTCTG TATCCCTGGT CAACTGCCCC AGTACTTTTC ATTCGTAGTT
TCGCCGGCGG GTACTGGTGT TGTCAGCGGT AATGGCCAAG TCGCTGGCGC TGACTGGTGG
CCCGCGAATG GCGCTGCCGC TGGCGTAGCA ATGCCGGTGC AGGTTGGTAA CCAGCTACGC
GGCCGCTTGT TCACCGGCAT GCCGGCATTC GAAAGCGCGG TATGGCGGGC CATTGCGGCG
GAGCAGGGGT TGCTCGGTCA ATTCGATGAG GTGAATCAGC GTCGAATCAT CAGGGGTTTT
CCACCCGTGG CCCCGCGAGC AAGTTGGAGC GGCGCGCGAC ACGAGTTTGA GCTTCGTCAT
GTTGGAGCTG TTGATGTTGG CTCTGGGTTG TACAACCTTG ACCAGCTAAG AATCCACACA
CCAGCGGACA CTCTAGGCGT GCCGGCAGTG GTCCTGCCGT TCGAGCCGTG GTTCGCCGCC
AGTCTGGCCC TTGAGTTCGA TGCTGGCATT GTTCAGGGCC AACCATCACG CACCTGGACG
CCGTTGGTGG CCCCAGGCGC GGAGCTGCTC GGCCCGACAC CCTTGCCGGA GGGGCCGTTA
CTGCCGGGCA TTCTGCCAGG CGATACCTTG GATCCTGTGG GGCCAAGTCT TGAAATACTT
CCTGGCGAGA ATCCGGACGA GACAGGGGCC ATAATTCCTG GATTCGGTGG TGATGTAGAT
CTGCCGGAGC CTGGGCTGGT TAATAATGAA CCTGCAGAAG TCGGAGAAAC TGGGAATTAT
AATGACTTGG AGCGTCGCAG CATAAGGGAT GACATGGACG TGGACCACAT TCCATCTCAA
TCCGCATTGA AACGATGGTT ACAGAAAAAT TTTCCAGACC TGCAACTGTA TGAAATATAC
CAAATACTAA GGCGTGCACC TGCTGTCGTT ATTCCTACAG AAGTGCATCG AAAGTACAGC
GAAACGTACG GCGGGCGTAA CACCAAAGCT AAACAAGCTC TAGATGCCAA AGATCCCTTG
TCAGCTATTG GCAGTAATGT TGAAGCACTA AAGAAAGGTT TAATAGAAAA TGGAATTTCG
CCTGAACGTG TTGAGGGTAT CAAGGTGGAG CTTACAGAAT TGCTCAAAAA ACTGATTAAT
AAAAGGTGA
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| Protein sequence | MAQNTLHDSS TGDVVITPGS SGSSSGGGGF FSIGGGGGFG GGFGGSSRRR KKKRARARAA
ALAQARAQEQ ARQAAAARAH AEMLAALHRQ QVEAHSQARE VRRVQLDAHF AGQAQGLAQA
LQQEINAARK RPEYDGSERW QLYQITKAQN ETKGLIAAKQ LELANRQALA GAFAGHDADA
GTYAARLAGL ATAQHMQQLH QGWETAYVAA SEARLLQEAI AQLSQRSAEL AVEHAQQEQL
WRAREAEWER QRQYAELRES RIRYKQQVDE DRRLVRLKEA ATLTVPVAAA SAGGVLLGQA
GAQVAAELAT AIEQAIASAA KEVLRVAAIR LGQAVGLSAT AMLYSPALGN GELTEAQRRR
HFEGLGIHAD LLGIAPGQDL QAIADAGGSA RLGQRIKIEH LPGGSAIAVA ATGAGIAPEV
RVRNAVYDPV TDTYRVEAQT PDGKTIVLGN ATPVAESPSN GRMLALEPQA AEVGAGVDLR
FDDCIVCIPG QLPQYFSFVV SPAGTGVVSG NGQVAGADWW PANGAAAGVA MPVQVGNQLR
GRLFTGMPAF ESAVWRAIAA EQGLLGQFDE VNQRRIIRGF PPVAPRASWS GARHEFELRH
VGAVDVGSGL YNLDQLRIHT PADTLGVPAV VLPFEPWFAA SLALEFDAGI VQGQPSRTWT
PLVAPGAELL GPTPLPEGPL LPGILPGDTL DPVGPSLEIL PGENPDETGA IIPGFGGDVD
LPEPGLVNNE PAEVGETGNY NDLERRSIRD DMDVDHIPSQ SALKRWLQKN FPDLQLYEIY
QILRRAPAVV IPTEVHRKYS ETYGGRNTKA KQALDAKDPL SAIGSNVEAL KKGLIENGIS
PERVEGIKVE LTELLKKLIN KR
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