Gene PputGB1_5366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5366 
Symbol 
ID5873181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5989218 
End bp5989562 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content59% 
IMG OID641550502 
Producthypothetical protein 
Protein accessionYP_001671583 
Protein GI167036352 
COG category[S] Function unknown 
COG ID[COG4315] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.965277 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.371852 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTTT TCGCTGCGCT GGCGCTTCCG GGGGTGGCGT CCGCCCACCA TGCCATGGAG 
AAGGACGGCA TGTGGGTCGA TCATGCCGGC ATGACCCTTT ACACCTTCGA CAAGGATGCG
GGTGGAAAGT CGATGTGCAA TGGCGATTGC GCCACCAACT GGCCGCCGCT GAAAGTGATG
GATGGCGAAA AAGCCGAGGG CAAGTGGACG CATATAAAGC GTGATGACGG CTCGATGCAA
TGGGCCTATG ACGGCAAGCC GCTGTATACC TTCGTCAAGG ACAAGAAGGC TGGGGACATG
ACGGGTGATG GCGTCAAAGA CGTGTGGCAC GTCGCCAAGC CTTGA
 
Protein sequence
MALFAALALP GVASAHHAME KDGMWVDHAG MTLYTFDKDA GGKSMCNGDC ATNWPPLKVM 
DGEKAEGKWT HIKRDDGSMQ WAYDGKPLYT FVKDKKAGDM TGDGVKDVWH VAKP