| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5355 |
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| Symbol | |
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| ID | 5873170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5979441 |
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| End bp | 5979869 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641550491 |
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| Product | biopolymer transport protein ExbD |
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| Protein accession | YP_001671572 |
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| Protein GI | 167036341 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.610359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.681563 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCCTGC ATCTCAACGA AGGTGGCGAC GACCTCGCCG AAAACCACGA AATCAACGTT
ACGCCGTTCA TCGACGTAAT GCTGGTGCTG CTGATCATCT TCATGGTCGC AGCCCCCTTG
GCCACGGTCG ACATCAAGGT CGACCTGCCG GCCTCGACCG CCAAACCGGC GCCGAGGCCC
GAGAAGCCGG TGTTCGTCAG CGTCAAGGCC GACCAGAAGC TGTACGTCGG CGACGATCAG
GTTGCTGCGC CCGAACAGCT TGGCCCGATG CTCGACGCCA AGACCAAGGG TGACAAGGAA
ACCACCATCT TCTTCCAGGC CGACAAAGGC GTGGATTACG GTGACCTGAT GGAAGTGATG
AACAACATGC GCGCGGCCGG CTACCTCAAG GTCGGTCTGG TAGGTCTCGA GACGGCAGCC
AAGAAATGA
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| Protein sequence | MGLHLNEGGD DLAENHEINV TPFIDVMLVL LIIFMVAAPL ATVDIKVDLP ASTAKPAPRP
EKPVFVSVKA DQKLYVGDDQ VAAPEQLGPM LDAKTKGDKE TTIFFQADKG VDYGDLMEVM
NNMRAAGYLK VGLVGLETAA KK
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