| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5346 |
|---|
| Symbol | |
|---|
| ID | 5873161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5970156 |
|---|
| End bp | 5970923 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641550482 |
|---|
| Product | peptidase C26 |
|---|
| Protein accession | YP_001671563 |
|---|
| Protein GI | 167036332 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2071] Predicted glutamine amidotransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.176756 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA CTGCGGTCCC CTTGATCGGT GTCAGCGCCT GCCGTCAGCA GGTGGGGAAG
AACTCGTCGC ACACGGTGGG CGACAAGTAT GTCGAGGCGG CCGGCTTTGC CGGCTTACCG
CTGATCTTGC CGGCCCGTGA TGGCGGCAGC GACACGCATG CGCTGCTGGC TCGCCTGCAC
GGCATTGTTT TTACCGGCTC GCCTTCAAAT ATCGAACCGC ATCATTACAA TGGCGCCCCC
AGTGTGGCAG GTACCCGGCA TGACCTGGCG CGTGATCGCC TGACCCTGCC GCTGCTGCAG
GCGGCCATTG CCGCCGGTGT GCCGGTGTTC TGCATTTGCC GTGGCTACCA GGAACTGAAC
GTGGCCCTTG GCGGCAGCCT GCACCAGCGC GTGCAGGAAC TGCCTGGATA CCTGGATCAC
CGCGAACCTG AGGATGCCCC CCTGGAGGTG CAGTACGGCC CTCGTCACCC GGTCGGCATC
GAGCCTGGCG GGTTGTTCGA GCGCTTGGGC CTGGCGGCGC AGTTCGAGGT CAACTCGCTG
CACAGTCAGG GCATCGACCG CCTGGCCCCA GGCCTGCGTG TCGAGGCACG GGCCCCGGAT
GGCCTGATCG AAGCAGTGTC CATGCCCGAC GCGCCGGGCT TTGTGCTTGG CGTGCAGTGG
CACCCGGAGT GGCGCTTCAA CGAAAACCCG GTCTCGCTGC GCCTGTTTCA GGCGTTTCGC
GAGGCCTGCA TTGCCTATGC AGCACGGGAG GGTGCACGGC AGGAATGA
|
|---|
| Protein sequence | MSATAVPLIG VSACRQQVGK NSSHTVGDKY VEAAGFAGLP LILPARDGGS DTHALLARLH
GIVFTGSPSN IEPHHYNGAP SVAGTRHDLA RDRLTLPLLQ AAIAAGVPVF CICRGYQELN
VALGGSLHQR VQELPGYLDH REPEDAPLEV QYGPRHPVGI EPGGLFERLG LAAQFEVNSL
HSQGIDRLAP GLRVEARAPD GLIEAVSMPD APGFVLGVQW HPEWRFNENP VSLRLFQAFR
EACIAYAARE GARQE
|
|---|
| |