Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5343 |
Symbol | |
ID | 5873158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5966882 |
End bp | 5967745 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641550479 |
Product | hypothetical protein |
Protein accession | YP_001671560 |
Protein GI | 167036329 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.02593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGCACA GCATGACCGC TTTTGCTCGT GTCGAGCGCG CCGGCAGCCA AGGCACCCTG GTCTGGGAGC TGCGCTCGGT CAACCACCGC TACCTGGAGC CGCACCTGCG TCTGCCCGAG GCCCTGCGCG ACCTCGAAGG CGGTGTACGT GAAGGCCTGC GCCAGGGCCT TTCGCGAGGC AAGGTGGAGT GCACCTTGCG CCTCAACGAA GACAGCAACG GCAAACCGCT GAAGGTGGAC CACGCGCGCG CCGCGCAACT GGTTGCCGCG GCCGAGGAAG TCGCCAGCCT GATCAAGCAG CCGGCGCCCT TGAACCCCCT GGAAGTGCTG TCGTGGCCGG GCGTGCTGGT GGCTGACACC AGCGACCCGC AGGCCCTGAA CGCTGAAGCC ATGGCGCTGT TCGACGAAGC ACTGGCCGAG CTCAAGGCCG GGCGCCAGCG CGAAGGCCAG GAACTGGCCC GGCTGATCAA CGAGCGCCTG GACAACATGG CCAGCGAAGT CACCACCCTG CGCGCCTTGG TCCCGCAGAT GCTGGCAGCA CAGCGGCAAA AGATTCTCGA CCGCTTCGGC GATATGCAGG CTGAGCTGGA CCCGCAGCGC CTGGAGCAGG AGATGGTGCT GCTGGCCCAG AAGAGCGACG TGGCCGAAGA ACTCGACCGC CTCAGCACTC ACGTTACCGA AGTGCGCCGG GTACTCAAGG GTGGCGGCGC CGCCGGCCGA CGCCTGGATT TCCTGATGCA GGAACTCAAC CGCGAAGCCA ACACCCTCGG CTCCAAGGCC TTCGACCCAC GCAGCACGCA AGCGGCGGTC AACCTGAAGG TATTGATCGA ACAGATGCGT GAACAAGTAC AGAACATCGA GTAA
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Protein sequence | MVHSMTAFAR VERAGSQGTL VWELRSVNHR YLEPHLRLPE ALRDLEGGVR EGLRQGLSRG KVECTLRLNE DSNGKPLKVD HARAAQLVAA AEEVASLIKQ PAPLNPLEVL SWPGVLVADT SDPQALNAEA MALFDEALAE LKAGRQREGQ ELARLINERL DNMASEVTTL RALVPQMLAA QRQKILDRFG DMQAELDPQR LEQEMVLLAQ KSDVAEELDR LSTHVTEVRR VLKGGGAAGR RLDFLMQELN REANTLGSKA FDPRSTQAAV NLKVLIEQMR EQVQNIE
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