| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5342 |
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| Symbol | rph |
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| ID | 5873157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5965931 |
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| End bp | 5966653 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550478 |
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| Product | ribonuclease PH |
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| Protein accession | YP_001671559 |
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| Protein GI | 167036328 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR01966] ribonuclease PH |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.452896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0235575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGTC CAAGTGGTCG CGCCGCCGAT CAGCTTCGCT CGATCCGCAT CACCCGCAAC
TACACCAAGC ACGCCGAAGG GTCGGTACTG GTTGAGTTCG GTGACACCAA GGTCATTTGC
ACGGTCAGCG TGGAAAACGG TGTACCGCGC TTCCTCAAAG GCCAGGGCCA AGGCTGGCTG
ACCGCCGAAT ATGGCATGCT GCCGCGCTCC ACCGGCGAAC GTAACCAGCG CGAAGCCAGC
CGTGGCAAGC AGGGTGGCCG CACCCTGGAA ATCCAGCGCC TGATCGGCCG TTCGCTGCGT
GCGGCGCTCG ACATGAGCAA GCTCGGTGAC ATCACCCTGT ACGTTGACTG CGACGTGATC
CAGGCCGATG GCGGTACCCG TACCGCGTCC ATCACTGGCG CCATGGTCGC CCTGTGCGAT
GCCCTGGCGG TGATCAAGAA GCGCGGTGGC CTCAAGGCCG GCAACCCGCT CAAGCACATG
ATCGCTGCCG TGTCGGTGGG CATGTACCAG GGCGAAGCCG TACTCGACCT GGACTACCCG
GAAGACTCCG CTGCCGAAAC CGACCTGAAC GTGGTCATGA CCAGTGCCGG CGGCTTCATC
GAAGTGCAGG GTACTGCCGA AGGCGCACCG TTCCAGCCGG AAGACTTCAA CGCCATGCTC
GCCCTGGCGC AGAAGGGCAT GAACGAGATC TTCGAACTGC AGCAGGCCGC ACTGGCTGAC
TGA
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| Protein sequence | MKRPSGRAAD QLRSIRITRN YTKHAEGSVL VEFGDTKVIC TVSVENGVPR FLKGQGQGWL
TAEYGMLPRS TGERNQREAS RGKQGGRTLE IQRLIGRSLR AALDMSKLGD ITLYVDCDVI
QADGGTRTAS ITGAMVALCD ALAVIKKRGG LKAGNPLKHM IAAVSVGMYQ GEAVLDLDYP
EDSAAETDLN VVMTSAGGFI EVQGTAEGAP FQPEDFNAML ALAQKGMNEI FELQQAALAD
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