Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5339 |
Symbol | |
ID | 5873154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5963383 |
End bp | 5964288 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550475 |
Product | acetylglutamate kinase |
Protein accession | YP_001671556 |
Protein GI | 167036325 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0548] Acetylglutamate kinase |
TIGRFAM ID | [TIGR00761] acetylglutamate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.866501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00605357 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCCTCG ATCGCGATGC CGCTTCCCAT GTAGCCGAGG TTTTGTCCGA AGCACTGCCT TACATCCGCC GCTTTGTCGG CAAGACCCTG GTGATCAAGT ACGGCGGCAA CGCGATGGAA AGCGAGGAGC TCAAGACCGG CTTCGCCCGC GACATCGTGC TGATGAAGGC TGTGGGCATC AACCCCGTGG TAGTCCACGG TGGCGGCCCG CAGATCGGCG ACCTGCTCAA GCGCCTGTCG ATCGAAAGCC ACTTCATCGA TGGCATGCGC GTCACCGACT CGGCGACCAT GGATGTGGTG GAGATGGTGC TGGGTGGCCA GGTGAACAAG GACATCGTCA ACCTGATCAA CCGCCACGGC GGCAGCGCGA TCGGCCTGAC CGGCAAGGAT GCGGAGCTGA TCCGCGCCCG CAAGCTGACC GTCAGCCGCC AGACGCCCGA GATGACCACC CCGGAAATCA TCGACATCGG CCACGTGGGC GAAGTGGTGA GCGTGAACAC CGACCTGCTG AACATGCTGG TGAAAGGCGA CTTCATCCCG GTGATCGCGC CAATCGGCGT GGGCGCCAAC GGTGAGTCGT ACAACATCAA CGCCGACCTG GTGGCAGGCA AGGTAGCCGA GGCGCTGAAG GCCGAGAAGC TGATGCTGCT GACCAACATC GCCGGCCTGA TGGACAAGCA GGGCCAGGTA CTGACCGGCC TGACCACCGA GCAGGTCAAC GAACTGATCG CCGACGGCAC CATCTATGGC GGCATGCTGC CGAAGATCAG GTGTGCGCTG GATGCGGTGC AGGGCGGCGT GAACAGCTCG CACATCATCG ATGGCCGCGT GCCGAACGCT GTGCTGCTGG AAATCTTCAC CGACAGCGGC GTGGGTACCC TGATCACCAA CCGCAAGCCG CGCTGA
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Protein sequence | MTLDRDAASH VAEVLSEALP YIRRFVGKTL VIKYGGNAME SEELKTGFAR DIVLMKAVGI NPVVVHGGGP QIGDLLKRLS IESHFIDGMR VTDSATMDVV EMVLGGQVNK DIVNLINRHG GSAIGLTGKD AELIRARKLT VSRQTPEMTT PEIIDIGHVG EVVSVNTDLL NMLVKGDFIP VIAPIGVGAN GESYNINADL VAGKVAEALK AEKLMLLTNI AGLMDKQGQV LTGLTTEQVN ELIADGTIYG GMLPKIRCAL DAVQGGVNSS HIIDGRVPNA VLLEIFTDSG VGTLITNRKP R
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