Gene PputGB1_5331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5331 
Symbol 
ID5873146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5956495 
End bp5956854 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content61% 
IMG OID641550467 
Productprotein of unknown function DUF861 cupin_3 
Protein accessionYP_001671548 
Protein GI167036317 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.038012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATAG ACAGCATCAT CGACTTCGCC CAGGTCATCA CAGAGGCCGA ACGCTACCGC 
CCAGCGGCGG AAAAAATCCT CAAGGGTGAG CCAGACCAGG CGGTCTACAA CCACTATTCC
AGCCCGTGCG GGCAGTTTGC CGCTGGCGTG TGGGAGGGTG AGGTGGGCCA GTGGACGGTG
AACTACACCG AGCATGAATA CTGCGAGATC GTTCAGGGCG TTTCGGTGCT GCGCGACCAG
GACGGCGGAG CGAAAACCCT GCGTGCCGGC GATCGGTTTG TCATCCCCGC CGGGTTCAAG
GGCACCTGGG AGGTGCTGGA GCCGTGCCGC AAGATCTATG TGATGTTCGA GCAGAAATGA
 
Protein sequence
MRIDSIIDFA QVITEAERYR PAAEKILKGE PDQAVYNHYS SPCGQFAAGV WEGEVGQWTV 
NYTEHEYCEI VQGVSVLRDQ DGGAKTLRAG DRFVIPAGFK GTWEVLEPCR KIYVMFEQK