Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5331 |
Symbol | |
ID | 5873146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5956495 |
End bp | 5956854 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641550467 |
Product | protein of unknown function DUF861 cupin_3 |
Protein accession | YP_001671548 |
Protein GI | 167036317 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.038012 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCATAG ACAGCATCAT CGACTTCGCC CAGGTCATCA CAGAGGCCGA ACGCTACCGC CCAGCGGCGG AAAAAATCCT CAAGGGTGAG CCAGACCAGG CGGTCTACAA CCACTATTCC AGCCCGTGCG GGCAGTTTGC CGCTGGCGTG TGGGAGGGTG AGGTGGGCCA GTGGACGGTG AACTACACCG AGCATGAATA CTGCGAGATC GTTCAGGGCG TTTCGGTGCT GCGCGACCAG GACGGCGGAG CGAAAACCCT GCGTGCCGGC GATCGGTTTG TCATCCCCGC CGGGTTCAAG GGCACCTGGG AGGTGCTGGA GCCGTGCCGC AAGATCTATG TGATGTTCGA GCAGAAATGA
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Protein sequence | MRIDSIIDFA QVITEAERYR PAAEKILKGE PDQAVYNHYS SPCGQFAAGV WEGEVGQWTV NYTEHEYCEI VQGVSVLRDQ DGGAKTLRAG DRFVIPAGFK GTWEVLEPCR KIYVMFEQK
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