Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5323 |
Symbol | |
ID | 5873138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5947627 |
End bp | 5948115 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641550459 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001671540 |
Protein GI | 167036309 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0644813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCC AGCACCAGAG CAAGCGTGAA CTGGACAAGA TCGACCGCAA CATCCTGCGG ATCCTGCAGA ATGACGGCCG TATTTCCTTC ACCGAACTGG GCGAGAAAGT TGGGCTGTCC ACAACCCCTT GCACCGAGCG GGTTCGCCGC CTGGAGCGCG AGGGCATCAT CATGGGCTAC AACGCCCGCC TGAACCCGCA GCACCTCAAG GGCAGCCTGC TGGTGTTCGT GGAAATCAGC CTGGACTACA AGTCGGGCGA CACCTTCGAG GAGTTCCGCC GTGCGGTGCT GAAGCTGCCG CACGTACTGG AGTGCCATTT GGTATCCGGT GACTTCGACT ACCTGGTGAA GGCGCGTATT TCGGAGATGG CCTCGTACCG CAAGCTGCTT GGCGACATCC TGCTGAAGCT GCCGCACGTG CGCGAATCGA AGAGCTACAT CGTGATGGAA GAAGTCAAAG AAAGCCTCTG CCTGCCGATC CCGGACTGA
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Protein sequence | MRTQHQSKRE LDKIDRNILR ILQNDGRISF TELGEKVGLS TTPCTERVRR LEREGIIMGY NARLNPQHLK GSLLVFVEIS LDYKSGDTFE EFRRAVLKLP HVLECHLVSG DFDYLVKARI SEMASYRKLL GDILLKLPHV RESKSYIVME EVKESLCLPI PD
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