Gene PputGB1_5323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5323 
Symbol 
ID5873138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5947627 
End bp5948115 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID641550459 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001671540 
Protein GI167036309 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0644813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCC AGCACCAGAG CAAGCGTGAA CTGGACAAGA TCGACCGCAA CATCCTGCGG 
ATCCTGCAGA ATGACGGCCG TATTTCCTTC ACCGAACTGG GCGAGAAAGT TGGGCTGTCC
ACAACCCCTT GCACCGAGCG GGTTCGCCGC CTGGAGCGCG AGGGCATCAT CATGGGCTAC
AACGCCCGCC TGAACCCGCA GCACCTCAAG GGCAGCCTGC TGGTGTTCGT GGAAATCAGC
CTGGACTACA AGTCGGGCGA CACCTTCGAG GAGTTCCGCC GTGCGGTGCT GAAGCTGCCG
CACGTACTGG AGTGCCATTT GGTATCCGGT GACTTCGACT ACCTGGTGAA GGCGCGTATT
TCGGAGATGG CCTCGTACCG CAAGCTGCTT GGCGACATCC TGCTGAAGCT GCCGCACGTG
CGCGAATCGA AGAGCTACAT CGTGATGGAA GAAGTCAAAG AAAGCCTCTG CCTGCCGATC
CCGGACTGA
 
Protein sequence
MRTQHQSKRE LDKIDRNILR ILQNDGRISF TELGEKVGLS TTPCTERVRR LEREGIIMGY 
NARLNPQHLK GSLLVFVEIS LDYKSGDTFE EFRRAVLKLP HVLECHLVSG DFDYLVKARI
SEMASYRKLL GDILLKLPHV RESKSYIVME EVKESLCLPI PD