Gene PputGB1_5319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5319 
Symbol 
ID5873134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5943729 
End bp5944151 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID641550455 
Productcytochrome c5 
Protein accessionYP_001671536 
Protein GI167036305 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.241325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCAAA TCAAGAAGAT GCTGGCCGTA CCAGCAGCCG TATTCGCCCT CTGGGCAATG 
AGCGCAACCG CTGCGACCAA TGACGACATC GCCAAACGCC TGGAACCGGT TGGCCAGGTG
TGCGTCCAGG GCCAGGAATG CAAGGGCATG GAAGTGGCTG CAGCAGCGGG GGGCGGGGGC
GCCAAGACGC CAGATGACAT CATCGCCAAG CACTGCAATG CCTGTCATGG CACTGGCCTG
CTGGGGGCAC CGAAAATTGG CGATACCGCC GCGTGGAAAG AGCGCGCCGA TCACCAGGGC
GGCCTCGACG GTATCCTGGC CAAGGCCATT ACCGGTATCA ACGCCATGCC GCCCAAAGGC
ACCTGCGCGG ACTGCTCGGA TGACGACCTG AAAGGGGCGA TCAAGAAAAT GTCCGGGCTG
TAA
 
Protein sequence
MNQIKKMLAV PAAVFALWAM SATAATNDDI AKRLEPVGQV CVQGQECKGM EVAAAAGGGG 
AKTPDDIIAK HCNACHGTGL LGAPKIGDTA AWKERADHQG GLDGILAKAI TGINAMPPKG
TCADCSDDDL KGAIKKMSGL