Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5319 |
Symbol | |
ID | 5873134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5943729 |
End bp | 5944151 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550455 |
Product | cytochrome c5 |
Protein accession | YP_001671536 |
Protein GI | 167036305 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.241325 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCAAA TCAAGAAGAT GCTGGCCGTA CCAGCAGCCG TATTCGCCCT CTGGGCAATG AGCGCAACCG CTGCGACCAA TGACGACATC GCCAAACGCC TGGAACCGGT TGGCCAGGTG TGCGTCCAGG GCCAGGAATG CAAGGGCATG GAAGTGGCTG CAGCAGCGGG GGGCGGGGGC GCCAAGACGC CAGATGACAT CATCGCCAAG CACTGCAATG CCTGTCATGG CACTGGCCTG CTGGGGGCAC CGAAAATTGG CGATACCGCC GCGTGGAAAG AGCGCGCCGA TCACCAGGGC GGCCTCGACG GTATCCTGGC CAAGGCCATT ACCGGTATCA ACGCCATGCC GCCCAAAGGC ACCTGCGCGG ACTGCTCGGA TGACGACCTG AAAGGGGCGA TCAAGAAAAT GTCCGGGCTG TAA
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Protein sequence | MNQIKKMLAV PAAVFALWAM SATAATNDDI AKRLEPVGQV CVQGQECKGM EVAAAAGGGG AKTPDDIIAK HCNACHGTGL LGAPKIGDTA AWKERADHQG GLDGILAKAI TGINAMPPKG TCADCSDDDL KGAIKKMSGL
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