Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5294 |
Symbol | |
ID | 5873109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5912489 |
End bp | 5913820 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550430 |
Product | ammonium transporter |
Protein accession | YP_001671511 |
Protein GI | 167036280 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0004] Ammonia permease |
TIGRFAM ID | [TIGR00836] ammonium transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCTGC GTAAGATCGC AGGGCTAGGA GCCCTATTGT CCCTCGTAAT GCCCGGGCTT GCCCTGGCAG AGGAAGCTGC CCCAGCGCTG AACTCCGGCG ATACCGCCTG GATGCTGACC GCAACGGCGC TGGTGCTGTT CATGACCATT CCGGGCCTGG CCCTGTTCTA TGGCGGCATG GTGCGTTCCA AGAACGTGCT GTCGGTGATG ATGCAGTGCT TTGCAATCAC CGGCCTGATG AGCATTCTCT GGGTCGTTTA CGGCTACAGC ATGGCCTTCG ATACCACCGG TATGGAAAAG GGCGTGCTCA ACTTCAACTC CTTCGTTGGC GGTTTCTCCA AAGCCTTTCT CAGCGGCGTA ACGCCCGAGA ACTTGACCTC GGCCACCGCG CTGTTCCCTG AAGCGGTATT CATCACCTTC CAGATGACAT TTGCCATCAT CACCCCGGCG CTGATCGTCG GTGCCTTCGC CGAGCGCATG AAGTTCTCCG CGATGCTGGT GTTCATGGGT ATCTGGTTCA CCCTGGTGTA TGCGCCTATC GCGCACATGG TGTGGAGTGG TGACGGCGCA CTGATGTGGG ACTGGGGCGT GCTGGACTTC GCTGGCGGCA CCGTGGTGCA CATCAACGCC GGTATCGCAG GCCTGGTCAG CTGCCTGGTG CTGGGCAAGC GAAAAGGCTA CCCGACCACG CCGATGGCCC CGCACAACCT GGGCTATACC CTGATGGGTG CGGCCATGCT GTGGATCGGC TGGTTCGGCT TCAACGCAGG CTCCGCCGCT GCGGCCAACG GCACCGCCGG CATGGCCATG CTGGTCACCC AGATCGCCAC TGCCGCTGCG GCACTGGGCT GGATGTTCGC CGAGTGGATC GGCCACGGTA AACCCAGTGC CCTGGGCATC GCCTCGGGTG TGGTTGCCGG CCTGGTCGCC ATTACCCCGG CTGCAGGCAC CGTGGGCCCG ATGGGCGCTC TGGTGATTGG CCTGGCGTCG GGTGTGATCT GCTACTTCTG CGCCACCACC CTCAAGCGCA AGCTGGGCTA TGACGACTCG CTGGACGCTT TCGGCGTGCA CGGAATCGGC GGCATCATCG GTGCCATCCT CACCGGCGTG TTCGCAGCCC CTGCACTGGG CGGCTTCGGT ACCGTCACCG ACATCGGCAT GCAGGTCTGG ATCCAGGCCA AGGGCGTGAT CTTCACCGTG GTGTACACCG CCATCGTCAC CTACGTGATC CTCAAGGTGC TGGATGTGGT GATGGGCCTG CGGGTCAACG AAGAAGAAGA GTCGGTCGGC CTCGACCTGG CTCAGCACAA CGAACGCGGC TACAACCTGT AA
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Protein sequence | MTLRKIAGLG ALLSLVMPGL ALAEEAAPAL NSGDTAWMLT ATALVLFMTI PGLALFYGGM VRSKNVLSVM MQCFAITGLM SILWVVYGYS MAFDTTGMEK GVLNFNSFVG GFSKAFLSGV TPENLTSATA LFPEAVFITF QMTFAIITPA LIVGAFAERM KFSAMLVFMG IWFTLVYAPI AHMVWSGDGA LMWDWGVLDF AGGTVVHINA GIAGLVSCLV LGKRKGYPTT PMAPHNLGYT LMGAAMLWIG WFGFNAGSAA AANGTAGMAM LVTQIATAAA ALGWMFAEWI GHGKPSALGI ASGVVAGLVA ITPAAGTVGP MGALVIGLAS GVICYFCATT LKRKLGYDDS LDAFGVHGIG GIIGAILTGV FAAPALGGFG TVTDIGMQVW IQAKGVIFTV VYTAIVTYVI LKVLDVVMGL RVNEEEESVG LDLAQHNERG YNL
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