Gene PputGB1_5294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5294 
Symbol 
ID5873109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5912489 
End bp5913820 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content63% 
IMG OID641550430 
Productammonium transporter 
Protein accessionYP_001671511 
Protein GI167036280 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0004] Ammonia permease 
TIGRFAM ID[TIGR00836] ammonium transporter 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGC GTAAGATCGC AGGGCTAGGA GCCCTATTGT CCCTCGTAAT GCCCGGGCTT 
GCCCTGGCAG AGGAAGCTGC CCCAGCGCTG AACTCCGGCG ATACCGCCTG GATGCTGACC
GCAACGGCGC TGGTGCTGTT CATGACCATT CCGGGCCTGG CCCTGTTCTA TGGCGGCATG
GTGCGTTCCA AGAACGTGCT GTCGGTGATG ATGCAGTGCT TTGCAATCAC CGGCCTGATG
AGCATTCTCT GGGTCGTTTA CGGCTACAGC ATGGCCTTCG ATACCACCGG TATGGAAAAG
GGCGTGCTCA ACTTCAACTC CTTCGTTGGC GGTTTCTCCA AAGCCTTTCT CAGCGGCGTA
ACGCCCGAGA ACTTGACCTC GGCCACCGCG CTGTTCCCTG AAGCGGTATT CATCACCTTC
CAGATGACAT TTGCCATCAT CACCCCGGCG CTGATCGTCG GTGCCTTCGC CGAGCGCATG
AAGTTCTCCG CGATGCTGGT GTTCATGGGT ATCTGGTTCA CCCTGGTGTA TGCGCCTATC
GCGCACATGG TGTGGAGTGG TGACGGCGCA CTGATGTGGG ACTGGGGCGT GCTGGACTTC
GCTGGCGGCA CCGTGGTGCA CATCAACGCC GGTATCGCAG GCCTGGTCAG CTGCCTGGTG
CTGGGCAAGC GAAAAGGCTA CCCGACCACG CCGATGGCCC CGCACAACCT GGGCTATACC
CTGATGGGTG CGGCCATGCT GTGGATCGGC TGGTTCGGCT TCAACGCAGG CTCCGCCGCT
GCGGCCAACG GCACCGCCGG CATGGCCATG CTGGTCACCC AGATCGCCAC TGCCGCTGCG
GCACTGGGCT GGATGTTCGC CGAGTGGATC GGCCACGGTA AACCCAGTGC CCTGGGCATC
GCCTCGGGTG TGGTTGCCGG CCTGGTCGCC ATTACCCCGG CTGCAGGCAC CGTGGGCCCG
ATGGGCGCTC TGGTGATTGG CCTGGCGTCG GGTGTGATCT GCTACTTCTG CGCCACCACC
CTCAAGCGCA AGCTGGGCTA TGACGACTCG CTGGACGCTT TCGGCGTGCA CGGAATCGGC
GGCATCATCG GTGCCATCCT CACCGGCGTG TTCGCAGCCC CTGCACTGGG CGGCTTCGGT
ACCGTCACCG ACATCGGCAT GCAGGTCTGG ATCCAGGCCA AGGGCGTGAT CTTCACCGTG
GTGTACACCG CCATCGTCAC CTACGTGATC CTCAAGGTGC TGGATGTGGT GATGGGCCTG
CGGGTCAACG AAGAAGAAGA GTCGGTCGGC CTCGACCTGG CTCAGCACAA CGAACGCGGC
TACAACCTGT AA
 
Protein sequence
MTLRKIAGLG ALLSLVMPGL ALAEEAAPAL NSGDTAWMLT ATALVLFMTI PGLALFYGGM 
VRSKNVLSVM MQCFAITGLM SILWVVYGYS MAFDTTGMEK GVLNFNSFVG GFSKAFLSGV
TPENLTSATA LFPEAVFITF QMTFAIITPA LIVGAFAERM KFSAMLVFMG IWFTLVYAPI
AHMVWSGDGA LMWDWGVLDF AGGTVVHINA GIAGLVSCLV LGKRKGYPTT PMAPHNLGYT
LMGAAMLWIG WFGFNAGSAA AANGTAGMAM LVTQIATAAA ALGWMFAEWI GHGKPSALGI
ASGVVAGLVA ITPAAGTVGP MGALVIGLAS GVICYFCATT LKRKLGYDDS LDAFGVHGIG
GIIGAILTGV FAAPALGGFG TVTDIGMQVW IQAKGVIFTV VYTAIVTYVI LKVLDVVMGL
RVNEEEESVG LDLAQHNERG YNL