| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5274 |
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| Symbol | |
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| ID | 5873089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5891885 |
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| End bp | 5893351 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550411 |
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| Product | UbiD family decarboxylase |
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| Protein accession | YP_001671492 |
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| Protein GI | 167036261 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTATC GCGACTTGCG CGACTTCATC CGTGGCCTGG AACAGCGCGG CGAGCTCAAG
CGCATCCAGG TTCCGATCTC CCCCGTCCTG GAAATGACCG AGGTCTGCGA CCGCACCCTG
CGTGCCAAAG GCCCGGCGTT GCTGTTCGAA AAGCCCACCG GTTTCGACAT CCCGGTGCTG
GGCAACCTGT TCGGCACCCC GGAGCGGGTG GCCATGGGCA TGGGCGCCGA GTCGGTCGAT
GAGCTGCGGG AAATCGGCAA GCTGCTGGCC TTCCTCAAGG AGCCCGAGCC GCCCAAGGGC
CTGAAGGACG CCTGGTCGAA GCTGCCGATC TTCAAGAAGG TCGTGTCGAT GGCGCCGAAA
GTGGTCAAGG ACGCGGTGTG CCAGGAAGTG GTGGTCGAGG GTGACGATGT CGACCTCGGC
GCTCTGCCGA TTCAGCACTG CTGGCCAGGC GACGTGGCGC CGCTGATCAC CTGGGGCCTT
ACCGTGACCC GTGGCCCGAA CAAGGACCGC CAGAACCTGG GCATCTACCG CCAGCAGGTG
ATCGGCCGCA ACAAGGTCAT CATGCGCTGG CTGAGCCACC GTGGCGGTGC CTTGGATTAC
CGTGAGTGGT GCGAGAAGAA CCCCGGCCAG CCGTTCCCGG TCGCCGTGGC CCTGGGCGCT
GACCCGGCGA CCATCCTCGG TGCCGTGACC CCGGTGCCGG ACACCCTCTC CGAGTACGCC
TTTGCCGGCC TGCTGCGCGG CAATCGCACC GAGCTGGTCA AGTGCCGCGG CAGCAACCTG
CAGGTACCGG CCACCGCCGA AATCATTCTG GAAGGCGTGA TCCACCCAGG CGAAATGGCC
CCGGAAGGCC CCTATGGCGA CCACACCGGC TACTACAACG AAGTGGACAG CTTCCCGGTG
TTCACTGTCG AGCGCATCAC CCACCGGCAC AAACCGATCT ACCACAGCAC CTACACCGGT
CGGCCGCCAG ATGAGCCGGC GATTCTCGGT GTGGCACTGA ACGAAGTGTT CGTGCCGATC
CTGCAAAAGC AGTTCCCGGA AATCACCGAT TTCTACCTGC CGCCGGAAGG CTGCTCGTAC
CGCATGGCGG TGGTGACCAT GAAAAAGCAG TATCCGGGCC ATGCCAAGCG CGTAATGCTG
GGTGTGTGGT CGTTCCTGCG ACAGTTCATG TACACCAAGT TCGTTATTGT CACCGATGAC
GATATCAACG CCCGCGACTG GAACGATGTG ATCTGGGCCA TTACCACGCG CATGGACCCC
AAGCGTGATA CGGTGATGAT CGACAACACG CCGATCGACT ACCTGGACTT CGCGTCGCCG
GTATCGGGCC TGGGGTCGAA GATGGGCCTG GACGCCACGC ACAAGTGGCC GGGCGAGACT
ACACGCGAAT GGGGACGGGT TATCGTCAAG GACGAAGCCG TCACCCGCCG TATCGATGAG
CTGTGGGATC AGTTGGGAAT AGATTGA
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| Protein sequence | MQYRDLRDFI RGLEQRGELK RIQVPISPVL EMTEVCDRTL RAKGPALLFE KPTGFDIPVL
GNLFGTPERV AMGMGAESVD ELREIGKLLA FLKEPEPPKG LKDAWSKLPI FKKVVSMAPK
VVKDAVCQEV VVEGDDVDLG ALPIQHCWPG DVAPLITWGL TVTRGPNKDR QNLGIYRQQV
IGRNKVIMRW LSHRGGALDY REWCEKNPGQ PFPVAVALGA DPATILGAVT PVPDTLSEYA
FAGLLRGNRT ELVKCRGSNL QVPATAEIIL EGVIHPGEMA PEGPYGDHTG YYNEVDSFPV
FTVERITHRH KPIYHSTYTG RPPDEPAILG VALNEVFVPI LQKQFPEITD FYLPPEGCSY
RMAVVTMKKQ YPGHAKRVML GVWSFLRQFM YTKFVIVTDD DINARDWNDV IWAITTRMDP
KRDTVMIDNT PIDYLDFASP VSGLGSKMGL DATHKWPGET TREWGRVIVK DEAVTRRIDE
LWDQLGID
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