| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5267 |
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| Symbol | |
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| ID | 5873082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5883543 |
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| End bp | 5884502 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641550404 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001671485 |
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| Protein GI | 167036254 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.777645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAT ACGCCCCCAG AATTTTCGCC ACCGCGCTAA TCGCCCTGCT CGCCGCAGCT
GGCGGGCTGG GGTACTGGAA GTCGCTCCAC GACCAGTTGC CCGAAGGCCT GAGCATGGGC
AACGGCCGCC TTGAAGCCAC CGAAGTACAA ATCGCCAGCA AAATCCCAGG CCGCCTGGCC
GAAGTGCTGG TCGACGAAGG TGACAAGGTC ACCCGCGGCC AACTGCTGGC GCGTATCGAC
ACCCGCACCA TGGAAGCCCA ACGCAGCCAG GCCGAAGCCG AAGTGCTGCG CGCCCGGGAG
AACTACGCCG CCGCCCAGGC CAGCGTGCAA CTGCGCCAGA GCGAACTGCT GCTGGCCAGC
CAGGAGCTCA AGCGCGTGCG CGAGATCTTC CAGCGCAAGT ACGCCAGCCA ACAGTTGCTC
GATCAACAGC AGGCGCGCTT CGACACGGCC AACGCAGCGG TAGTCGCCGC CCGCGCCCAG
CTTGCAGCGA TCAAGGCCGC CATCGGCGCC GCCGAAGCCC AGGTGGCCCA GCTCACCAGT
GAAATCGACG ACAGCAGCCT GCGAGCGCCC ATCGACGGCA TCATCCAGCT GCGCCTGGCC
GAACCCGGTG AGGTGCTGGG TGCCGGCGGC CGAGTGCTGA TGCTGATCGA CCCCAGCGAC
CAGTACATGA ACCTGTACCT GCCGGCCTCC ACCAGCGGCC AGCTGACCGT GGGCGACCAG
GCGCGCATCG TGCTCGACGC CCTGCCCGAA CGCGCCCTGC CGGCCAAAGT GGCTTTTGTC
GCAGCCAAGG CCCAGTTCAC GCCCAAACAG GTGGAGACCC GCGACGAGCG GCAAAAGCTG
GTGTTCAGGG TCAAACTCCG CCTGACCGAC CCAGGTGTCG TGCCACAGGC TAAACCTGGC
ATGCCAGGCG CCGGCTATGT GCGCACGGCC GAGGTGGACT GGCCGGCCAA CCTGCAATGA
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| Protein sequence | MNRYAPRIFA TALIALLAAA GGLGYWKSLH DQLPEGLSMG NGRLEATEVQ IASKIPGRLA
EVLVDEGDKV TRGQLLARID TRTMEAQRSQ AEAEVLRARE NYAAAQASVQ LRQSELLLAS
QELKRVREIF QRKYASQQLL DQQQARFDTA NAAVVAARAQ LAAIKAAIGA AEAQVAQLTS
EIDDSSLRAP IDGIIQLRLA EPGEVLGAGG RVLMLIDPSD QYMNLYLPAS TSGQLTVGDQ
ARIVLDALPE RALPAKVAFV AAKAQFTPKQ VETRDERQKL VFRVKLRLTD PGVVPQAKPG
MPGAGYVRTA EVDWPANLQ
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