Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5266 |
Symbol | |
ID | 5873081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5882998 |
End bp | 5883459 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641550403 |
Product | hypothetical protein |
Protein accession | YP_001671484 |
Protein GI | 167036253 |
COG category | [S] Function unknown |
COG ID | [COG2947] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.561565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTACT GGCTGATGAA ATCCGAGCCC GACGAACTTT CCATCGAAGC CCTCGGCCGC CTGGGCGAAG CGCGCTGGGA CGGCGTGCGC AACTATCAGG CGCGTAATTT TCTGCGGGCC ATGAGCGAGG GTGACGAGTT TTTCTTCTAT CACTCCAGTT GCCCGCAGCC GGGCATCGCC GGCATTGCCA GAATTACCCG CGCGGCCTAT CCGGACCCGA CCGCGCTGGA CCCGCAAAGC CACTATTACG ATGCCAAGGC CACCGCCGAC AAAAACCCGT GGAGCGCGGT GGATGTAGCC CATGTGCAAA CCCTGCCACG GGTGCTGGAA CTGGGCTGGC TGAAACAGCA GGCCGGCCTG GCCGAGTTGC CACTGGTGCA AAAAGGCAGC CGCCTGTCGG TAATGCCGGT AACGCCCGAA CAATGGGCGG TGATTGTCGC GTTGCGCCAA ATGTGTAGCT AA
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Protein sequence | MAYWLMKSEP DELSIEALGR LGEARWDGVR NYQARNFLRA MSEGDEFFFY HSSCPQPGIA GIARITRAAY PDPTALDPQS HYYDAKATAD KNPWSAVDVA HVQTLPRVLE LGWLKQQAGL AELPLVQKGS RLSVMPVTPE QWAVIVALRQ MCS
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