Gene PputGB1_5253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5253 
Symbol 
ID5873067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5871619 
End bp5872002 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content62% 
IMG OID641550389 
Productglycine cleavage system protein H 
Protein accessionYP_001671471 
Protein GI167036240 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA TCCCCGCCGA CCTGCGTTTT GCCGAAAGCC ATGAATGGGC TCGCCTGGAA 
GCCGACGGCA GCGTGACCGT GGGTATCAGC GACCACGCCC AGCAAGCCTT GGGTGACGTG
GTGTTCGTCG AGTTGGCCGA AGTCGGCAAG GTATTCGCCG CTGGCGACGC TGCCGGCGTG
GTCGAGTCGG TCAAGGCCGC TTCGGACATC TACGCCCCGA TCGGTGGCGA AGTGATTGCC
GTCAACGAAG AACTGGCCGA CAGCCCAGAG CAGCTCAACG AAGAACCGTA CGGCGCGTGG
ATCTTCAAAC TGAAGCCAAG CGACAAGGCC GAGCTGGACA AGCTGCTGGA CGCTGCTGGT
TACGCAGCAG CTATCGGCGA GTAA
 
Protein sequence
MSNIPADLRF AESHEWARLE ADGSVTVGIS DHAQQALGDV VFVELAEVGK VFAAGDAAGV 
VESVKAASDI YAPIGGEVIA VNEELADSPE QLNEEPYGAW IFKLKPSDKA ELDKLLDAAG
YAAAIGE