Gene PputGB1_5248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5248 
Symbol 
ID5873062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5865472 
End bp5865942 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content58% 
IMG OID641550384 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001671466 
Protein GI167036235 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.58536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGCC AGCTGGACGC CTACGATCGC CGTATTCTCG AACTACTGCA AGAGGACGCT 
TCACTGTCCA GTGCACAGAT CGCCGAGCGC GTGGGGCTTT CGCAATCGCC GTGCTGGCGG
CGTATTCAGC GGTTGAAGGA AGAGGGGGTA ATTCGCGGGC AGGTAACCTT GCTGGACCGC
AAGAAGGTCG GCCTGAACAC GCAGATTTTT GCCGAGGTGA AGCTCAATGC TCACGGGCGT
TCCAACTTTA CCGAATTCAC CGAGGCGATC CGCGGGTTTC CGGAGGTGCT GGAGTGTTAT
GTGCTAATGG GGTCTGTGGA CTTTCTGCTG CGCATCGTCA CATCGGACAT CGAAGCTTAC
GAGCGCTTCT TCTTCGAAAA GCTGTCGAAC GTGCCGGGCA TTCAGGAAGT GAACTCGATT
GTGGCGCTGT CGGAGATCAA GTCCACCACC AGCCTGCCAC TGTCGCGGTG A
 
Protein sequence
MHSQLDAYDR RILELLQEDA SLSSAQIAER VGLSQSPCWR RIQRLKEEGV IRGQVTLLDR 
KKVGLNTQIF AEVKLNAHGR SNFTEFTEAI RGFPEVLECY VLMGSVDFLL RIVTSDIEAY
ERFFFEKLSN VPGIQEVNSI VALSEIKSTT SLPLSR