Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5248 |
Symbol | |
ID | 5873062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5865472 |
End bp | 5865942 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641550384 |
Product | AsnC family transcriptional regulator |
Protein accession | YP_001671466 |
Protein GI | 167036235 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.58536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGCC AGCTGGACGC CTACGATCGC CGTATTCTCG AACTACTGCA AGAGGACGCT TCACTGTCCA GTGCACAGAT CGCCGAGCGC GTGGGGCTTT CGCAATCGCC GTGCTGGCGG CGTATTCAGC GGTTGAAGGA AGAGGGGGTA ATTCGCGGGC AGGTAACCTT GCTGGACCGC AAGAAGGTCG GCCTGAACAC GCAGATTTTT GCCGAGGTGA AGCTCAATGC TCACGGGCGT TCCAACTTTA CCGAATTCAC CGAGGCGATC CGCGGGTTTC CGGAGGTGCT GGAGTGTTAT GTGCTAATGG GGTCTGTGGA CTTTCTGCTG CGCATCGTCA CATCGGACAT CGAAGCTTAC GAGCGCTTCT TCTTCGAAAA GCTGTCGAAC GTGCCGGGCA TTCAGGAAGT GAACTCGATT GTGGCGCTGT CGGAGATCAA GTCCACCACC AGCCTGCCAC TGTCGCGGTG A
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Protein sequence | MHSQLDAYDR RILELLQEDA SLSSAQIAER VGLSQSPCWR RIQRLKEEGV IRGQVTLLDR KKVGLNTQIF AEVKLNAHGR SNFTEFTEAI RGFPEVLECY VLMGSVDFLL RIVTSDIEAY ERFFFEKLSN VPGIQEVNSI VALSEIKSTT SLPLSR
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