| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5241 |
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| Symbol | |
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| ID | 5873055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5855109 |
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| End bp | 5856206 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641550377 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001671459 |
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| Protein GI | 167036228 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAA TGGGCAAGAC GTTGCTGGCC GCAGCCCTGA TGGGTGCCAT GGCTACTGCT
GCACAGGCTG ACGACAAGGT GTTGAACGTC TACAACTGGT CGGACTACAT CGCGCCGGAC
ACCATCGCCA AGTTCGAAAA GCAGACCGGT ATCAAGGTCA AGTACGACGT CTTCGACAGC
AACGAAACCC TGGAAGCCAA GCTGCTGGCA GGTAAGTCGG GCTATGACAT CGTCGTGCCC
TCGAACAACT TCCTGGCCAA GCAGATCAAG GCGGGTGTGT ACGAGGAACT GGACCGTTCG
AAACTGCCGA ACTGGAAAAA CCTCGACCCC GACCTGCTCA AGGCCGTTGG CGATGCCAGC
GACAAGGACA ACAAGCACGC CTTCCCGTAC ATGTGGGGTT CCATCGGCAT CGGCTACAAC
CCGGAGAAGG TCAAGGCCGC GCTGGGTGTC GACCACATCG ACTCGTGGGA CGCCGTGTTC
AAGCCTGAGA ACATCGCCAA GCTCAAGAGC TGCGGCGTAA GCTTCCTGGA TGCCCCGACC
GAAATGCTGC CGGCCGCACT GCACTACCTG GGCCTGCCGA GCAACAGCAC CAAGAAAGAA
GACCTGAAGG CCGCCGAGGA CCTGTTCCTC AAGGTCCGTC CTTCGATCAC CTACTTCCAC
TCGTCCAAGT ACATTGGCGA CCTGGCCAAC GGCAACATCT GCGTGGCCGT CGGTTATTCG
GGTGACGTCG AGCAGGCCAA GGCCCGTGCC CACGAAGCCG GCGACAAGAT CAAAGTGGAC
TACATCATTC CGAAAGAAGG TGCCGGTACT TTCTACGACA TGGTCGCCAT CCCGAAAGAT
GCCGAGCATA AAGACGCTGC CTACCAGTTC ATGGACTTCC TGATGCAGCC AGAAGTCATG
GCTGAAATCA CCAACGCCGT GCGCTTCCCG AACGGCAATG CTGCGGCTAC CCAGTTCGTG
GACAAGGACA TTACCAGCGA CCCGAGCATC TACCCGCCTG CCGAAGTGAA GAAGCAGCTG
TACGCAATCG CTGCGCCTGA AGCTTCTGCC CAGCGTGTGA TCACCCGCAG CTGGACCAAG
ATCAAGTCGG GCAAGTAA
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| Protein sequence | MNKMGKTLLA AALMGAMATA AQADDKVLNV YNWSDYIAPD TIAKFEKQTG IKVKYDVFDS
NETLEAKLLA GKSGYDIVVP SNNFLAKQIK AGVYEELDRS KLPNWKNLDP DLLKAVGDAS
DKDNKHAFPY MWGSIGIGYN PEKVKAALGV DHIDSWDAVF KPENIAKLKS CGVSFLDAPT
EMLPAALHYL GLPSNSTKKE DLKAAEDLFL KVRPSITYFH SSKYIGDLAN GNICVAVGYS
GDVEQAKARA HEAGDKIKVD YIIPKEGAGT FYDMVAIPKD AEHKDAAYQF MDFLMQPEVM
AEITNAVRFP NGNAAATQFV DKDITSDPSI YPPAEVKKQL YAIAAPEASA QRVITRSWTK
IKSGK
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