| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5240 |
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| Symbol | |
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| ID | 5873054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5853856 |
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| End bp | 5854950 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641550376 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001671458 |
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| Protein GI | 167036227 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTATTT CTGTATTCCG CAAGGCCTTG ATGGCCGGCG CGGGCCTGAC GCTGGCATGC
AGCGTCCAAG CGGCGCCAAC GGTGCATCTC TATAACTGGT CCGACTACAT CGGCCCGACC
ACACTCGCGG ACTTCGAGAA AGCCACGGGC ATCAAGCCCG TGCAGGACGT GTTCGACTCC
AACGAAACCC TGGAAGGCAA ACTGCTGGCC GGTAACACCG GCTATGACGT AGTGGTGCCG
TCCAACCATT TCCTCGGCAA GCAGATCAAG GCGGGCGCGT TCCAGAAGCT CGACAAGAAC
CTGCTGCCCA ATTATGCCAA CCTCGACCCG GCGTTGATGA AGCGCCTGGA AAAGAACGAT
CCAGGCAACC AGTACGCCGT GCCTTACCTG TGGGGCACCA ACGGCATCGG TTACAACGTC
GACAAGGTGA AGGCCGCGCT GGGCGTGGAC ACCATCGACT CCTGGGCCGT CTTGTTCGAG
CCCGAGAACA TGAAGAAGCT CGCCAAGTGC GGTGTGGCCT TCCTCGACTC GGCGGACGAA
ATGCTCCCGG CGGTGCTCAA CTACATGGGC CTCGACCCCA ACAGCACCGA CCCCAAGGAT
TACGCCAAGG CCGAGCAGAA GCTGCTGGCG GTGCGCCCGT ACGTGACCTA CTTCCACTCG
TCCAAGTACA TCACCGACCT GGCCAACGGC GACATTTGCG TCGCGGCAGG GTTCTCGGGT
GATGTGTTCC AGGCCAAGGC CCGAGCTGAA GAAGCGAAGA AGGGCGTGAA CCTGGCCTAC
GCCATTCCCA AGGAAGGCGG CAACCTCTGG TTCGACGTGC TGGCGATCCC CAAGGACGCC
AAGAACGTCA AAGAGGCGCA TGCCTTCATC AACTATTTGC TGAAACCTGA GGTTATCGCC
CAGGTCAGCG ATTACGTCGG TTACGCCAAC CCGAACCCCA AGGCTGGCGA CCTGATGGAC
CAGGCCGTGA GGACCGACGC TGCGGTTTAC CCACCGCAGG ATGTGCTGGA CAAGATGTTC
GTGAATTCAG AGTTGCCGCC CAAGGTGCAA CGTTTGATGA CCCGTAGCTG GACCAAGGTC
AAGTCGGGCA AGTAA
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| Protein sequence | MSISVFRKAL MAGAGLTLAC SVQAAPTVHL YNWSDYIGPT TLADFEKATG IKPVQDVFDS
NETLEGKLLA GNTGYDVVVP SNHFLGKQIK AGAFQKLDKN LLPNYANLDP ALMKRLEKND
PGNQYAVPYL WGTNGIGYNV DKVKAALGVD TIDSWAVLFE PENMKKLAKC GVAFLDSADE
MLPAVLNYMG LDPNSTDPKD YAKAEQKLLA VRPYVTYFHS SKYITDLANG DICVAAGFSG
DVFQAKARAE EAKKGVNLAY AIPKEGGNLW FDVLAIPKDA KNVKEAHAFI NYLLKPEVIA
QVSDYVGYAN PNPKAGDLMD QAVRTDAAVY PPQDVLDKMF VNSELPPKVQ RLMTRSWTKV
KSGK
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