| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5239 |
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| Symbol | |
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| ID | 5873053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5852653 |
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| End bp | 5853795 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641550375 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001671457 |
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| Protein GI | 167036226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGTTG CCTCCGGTGC CTATAAGAAA GCCCTCGAGG GTGGCCAGCA ACCCAAGCAG
GTGCTGGTCA AAATCGACCG GGTCACGAAG AAGTTCGACG AAACCATCGC CGTAGAGGAT
GTGTCCCTGG AAATCCGCAA GGGTGAGATC TTCGCCCTGC TGGGTGGCTC CGGATCCGGC
AAGTCCACCT TGCTGCGCAT GCTGGCCGGC TTCGAGCGCC CAACCGAAGG GCGGATTTTC
CTCGATGGCG TCGACATCAC CGATATGCCG CCCTACGAGC GGCCGATCAA CATGATGTTC
CAGTCCTACG CGCTGTTCCC GCATATGACC GTGGCGCAGA ACATCGCCTT CGGCCTGCAG
CAGGACAAGA TGCCCAAGGC CGAGATCGAT GCCCGTGTGG CCGAGATGCT CAAGCTGGTG
CACATGACCC AGTACGCCAA GCGCAAGCCG CACCAGTTGT CGGGTGGCCA GCGTCAGCGT
GTGGCGTTGG CCCGCTCGCT GGCCAAGCGC CCCAAGCTGC TGCTGCTCGA CGAGCCAATG
GGTGCGCTGG ACAAGAAACT GCGTTCGCAG ATGCAGCTGG AACTGGTGGA GATCATCGAG
CGCGTAGGCG TGACCTGCGT GATGGTGACC CACGACCAGG AAGAGGCCAT GACCATGGCC
CAGCGCATCG CCATCATGCA CCTGGGCTGG ATCGCCCAGA TCGGCTCGCC GGTGGACATC
TACGAGACGC CTACCAGCCG CCTGGTGTGC GAATTCATCG GTAACGTCAA CCTGTTCGAA
GGTGAAGTGG TCGACGACGC CGAAGGCCAC GCGATCATTG CCAGCCCGGA GCTGGAGCGC
AAGATCTACG TGGGCCACGG CATCACCACC TCGGTGGAAG ACAAGCACAT CACCTACGCC
TTGCGCCCGG AAAAGATGCT GGTCACCACC CAGCAGCCGA CCTGCGAGCA CAACTGGTCG
CGCGGCAAGG TCCACGACAT CGCCTACCTG GGCGGCCACT CGGTGTTCTA CGTCGAGCTG
CCGAGCGGCA AGGTTGTCCA GTCGTTCGTC GCCAACGCCG AACGCCAGGG CACTCGTCCG
ACCTGGGGCG ATGAAGTGTA CGTATGGTGG GAAGACGACA GCGGCGTGGT ACTGCGGTCA
TGA
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| Protein sequence | MAVASGAYKK ALEGGQQPKQ VLVKIDRVTK KFDETIAVED VSLEIRKGEI FALLGGSGSG
KSTLLRMLAG FERPTEGRIF LDGVDITDMP PYERPINMMF QSYALFPHMT VAQNIAFGLQ
QDKMPKAEID ARVAEMLKLV HMTQYAKRKP HQLSGGQRQR VALARSLAKR PKLLLLDEPM
GALDKKLRSQ MQLELVEIIE RVGVTCVMVT HDQEEAMTMA QRIAIMHLGW IAQIGSPVDI
YETPTSRLVC EFIGNVNLFE GEVVDDAEGH AIIASPELER KIYVGHGITT SVEDKHITYA
LRPEKMLVTT QQPTCEHNWS RGKVHDIAYL GGHSVFYVEL PSGKVVQSFV ANAERQGTRP
TWGDEVYVWW EDDSGVVLRS
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