Gene PputGB1_5206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5206 
Symbol 
ID5873020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5820646 
End bp5821311 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID641550342 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001671424 
Protein GI167036193 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.640418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACC AGCACCAGTA CGTAGACGGC ACGCGCATTC ACTTCCCGCT GGGCAAGGTG 
GTGTGCATCG GCCGTAACTA TGCCGAGCAT GCCAAGGAAC TGGACAACCC GATCCCCACC
GAACCGCTGC TGTTCATCAA GCCAGGCAGC TGTGTGGTGC CGGCCGAAGG CGGCTTCAAG
ATCCCGGCCG AGCGGGGTTC GGTGCACTAC GAGGCCGAAA TTGCCGTGCT GCTGGGCAAG
CCGCTGTCGG CCCACCCGAG CGAGGAAGAG GTGCTGGATG CCATTTCCGG CTACGCCCCG
GCGCTGGACC TGACCCTGCG CGACGTGCAG GCCAAACTGA AAGAGAAGGG CCTGCCGTGG
GAACTGGCCA AGTGCTTTGA CGGGGCCTGC GTACTGCCGC CGTTCGTCTC GGCCGCCAGT
TTCGAGGATG TCACCGACAT CCCGGTGCGC CTGACCGTCA ACGGCGAAGT GCGTCAGGAC
GGCAACAGCG CGATGATGCT GAACCCGATC GTGCCGATGA TCCAGTACAT GGCGGCGCAT
TTTTCGCTGC AGGCGGGGGA TGTGATCCTC ACCGGTACCC CGGCGGGTGT GGGGCCGTTC
AATGTCGGTG ACGAGCTGGT GCTGGAGCTG CCGGGTGTCA GCCGCTTCGA AAGCCGAGTG
TTCTGA
 
Protein sequence
MSYQHQYVDG TRIHFPLGKV VCIGRNYAEH AKELDNPIPT EPLLFIKPGS CVVPAEGGFK 
IPAERGSVHY EAEIAVLLGK PLSAHPSEEE VLDAISGYAP ALDLTLRDVQ AKLKEKGLPW
ELAKCFDGAC VLPPFVSAAS FEDVTDIPVR LTVNGEVRQD GNSAMMLNPI VPMIQYMAAH
FSLQAGDVIL TGTPAGVGPF NVGDELVLEL PGVSRFESRV F