Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5206 |
Symbol | |
ID | 5873020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5820646 |
End bp | 5821311 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550342 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_001671424 |
Protein GI | 167036193 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.640418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTACC AGCACCAGTA CGTAGACGGC ACGCGCATTC ACTTCCCGCT GGGCAAGGTG GTGTGCATCG GCCGTAACTA TGCCGAGCAT GCCAAGGAAC TGGACAACCC GATCCCCACC GAACCGCTGC TGTTCATCAA GCCAGGCAGC TGTGTGGTGC CGGCCGAAGG CGGCTTCAAG ATCCCGGCCG AGCGGGGTTC GGTGCACTAC GAGGCCGAAA TTGCCGTGCT GCTGGGCAAG CCGCTGTCGG CCCACCCGAG CGAGGAAGAG GTGCTGGATG CCATTTCCGG CTACGCCCCG GCGCTGGACC TGACCCTGCG CGACGTGCAG GCCAAACTGA AAGAGAAGGG CCTGCCGTGG GAACTGGCCA AGTGCTTTGA CGGGGCCTGC GTACTGCCGC CGTTCGTCTC GGCCGCCAGT TTCGAGGATG TCACCGACAT CCCGGTGCGC CTGACCGTCA ACGGCGAAGT GCGTCAGGAC GGCAACAGCG CGATGATGCT GAACCCGATC GTGCCGATGA TCCAGTACAT GGCGGCGCAT TTTTCGCTGC AGGCGGGGGA TGTGATCCTC ACCGGTACCC CGGCGGGTGT GGGGCCGTTC AATGTCGGTG ACGAGCTGGT GCTGGAGCTG CCGGGTGTCA GCCGCTTCGA AAGCCGAGTG TTCTGA
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Protein sequence | MSYQHQYVDG TRIHFPLGKV VCIGRNYAEH AKELDNPIPT EPLLFIKPGS CVVPAEGGFK IPAERGSVHY EAEIAVLLGK PLSAHPSEEE VLDAISGYAP ALDLTLRDVQ AKLKEKGLPW ELAKCFDGAC VLPPFVSAAS FEDVTDIPVR LTVNGEVRQD GNSAMMLNPI VPMIQYMAAH FSLQAGDVIL TGTPAGVGPF NVGDELVLEL PGVSRFESRV F
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