| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5202 |
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| Symbol | |
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| ID | 5873016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5816116 |
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| End bp | 5817630 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550338 |
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| Product | threonine dehydratase |
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| Protein accession | YP_001671420 |
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| Protein GI | 167036189 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAC AGTACGTCAA GAAGATCCTC ACCTCGCGCG TCTATGACGT TGCCGTCGAA
ACCCCGTTGC AGAGCGCCGG GCAACTGAGC AAGCGGCTGG GCAACCAGAT TTTGCTCAAG
CGCGAAGACC TGCAGCCGGT GTTCTCGTTC AAGATCCGCG GGGCGTACAA CAAGCTGGCC
CAGCTGAGCC CAGAGGAACT GGCCCGTGGC GTGGTCACCG CCTCGGCCGG CAACCACGCC
CAGGGCCTGG CCCTGGCTGC GCGCGAAATG GGCATCAAGG CCACCATCGT GATGCCCAAG
ACCACCCCGG AAATCAAGGT CGAGGGCGTG CGCTCACGGG GCGGCAAGGT GGTGTTGCAT
GGCGACTCGT TCCCCGAGGC GCTGGCCTAT TCGCTGAAAC TGGTCGACGA AAAGGGCTTT
GTCTATGTTC ACCCTTACGA CGACCCGCAC ACCATCGCCG GTCAGGGCAC CGTGGCCATG
GAAATCCTGC GCCAGCACCC TGGCCAGCTG GACGCGATCT TCGTGCCGGT GGGTGGCGGT
GGCCTGATCG CCGGTATTGC CGCCTACGTG AAGTACCTGC GCCCGGAAAT CAAGGTAATC
GGCGTCGAGC CGGATGACTC CAACTGCCTA CAGGCGGCCA TGGCCGCCGG TGAGCGCGTG
GTGCTGCCGC AGGTCGGGCT GTTCGCCGAC GGTGTGGCGG TGGCCCAGAT TGGCCAGCAC
ACCTTCGATA TCTGCCGCCA CCATGTGGAC GAAGTCGTCA CCGTCAGCAC AGACGAGATT
TGCGCAGCAA TCAAGGATAT CTACGACGAT ACCCGCTCGA TCACCGAACC TGCCGGCGCC
TTGGGCGTTG CGGGCATCAA GAAGTACGTC GAGCTGTATG GCGTGACCGG GCAGACGCTG
GTGGCTATCG ACTCTGGTGC CAACGTCAAC TTCGACCGCC TGCGCCATGT GGCCGAGCGT
GCCGAGTTGG GTGAAAAGCG TGAGGCGATC ATCGCCGTGA CCATTCCCGA GCGACCGGGC
AGCTTCAAGG CCTTCTGCGA GGCCATTGGC AAGCGCCAGA TCACCGAGTT CAACTACCGC
AAGCACACCT CGGACGAAGC GCATATCTTC GTGGGCGTGC AGACCCACCC GGAAAACGAC
CCGCGTGCAG CGCTGGTGCA GCAACTGACC GAGCAGGGCT TCCCAGTTAC CGACCTGACC
GACAACGAGC TTGCCAAGTT GCATATCCGC CATATGGTGG GTGGCCATTC GGCCGGTGCC
AGTGACGAAA TGGTACTGCG CTTCGAGTTT CCCGAGCGGC CAGGGGCGCT GTTCAACTTC
CTCAACAAGT TGGGCGGGCG CTGGAACATC TCGATGTTCC ACTACCGCAA CCATGGCGCA
GCTGACGGGC GTGTGGTGGC AGGCCTGCAG GTGCCGGAGG ATGAGCGCCA CCTGGTACCG
GCGGCGCTGG CCAAGATCGG CTACCCGTAC TGGGACGAGA CCGAAAACCC CGCTTACAAG
CTGTTCCTGG GCTGA
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| Protein sequence | MLEQYVKKIL TSRVYDVAVE TPLQSAGQLS KRLGNQILLK REDLQPVFSF KIRGAYNKLA
QLSPEELARG VVTASAGNHA QGLALAAREM GIKATIVMPK TTPEIKVEGV RSRGGKVVLH
GDSFPEALAY SLKLVDEKGF VYVHPYDDPH TIAGQGTVAM EILRQHPGQL DAIFVPVGGG
GLIAGIAAYV KYLRPEIKVI GVEPDDSNCL QAAMAAGERV VLPQVGLFAD GVAVAQIGQH
TFDICRHHVD EVVTVSTDEI CAAIKDIYDD TRSITEPAGA LGVAGIKKYV ELYGVTGQTL
VAIDSGANVN FDRLRHVAER AELGEKREAI IAVTIPERPG SFKAFCEAIG KRQITEFNYR
KHTSDEAHIF VGVQTHPEND PRAALVQQLT EQGFPVTDLT DNELAKLHIR HMVGGHSAGA
SDEMVLRFEF PERPGALFNF LNKLGGRWNI SMFHYRNHGA ADGRVVAGLQ VPEDERHLVP
AALAKIGYPY WDETENPAYK LFLG
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