Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5196 |
Symbol | |
ID | 5873010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5810265 |
End bp | 5811047 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550332 |
Product | hypothetical protein |
Protein accession | YP_001671414 |
Protein GI | 167036183 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCG TGCTCTATCT GCTGTTGGGC GCCTGTGCTG GTGTGCTGGC CGGGCTGTTC GGCGTGGGCG GTGGCATCAT CATCGTGCCG GTGCTGGTGT TCAGCTTCAC CTTGCAGGGC TTCGATGCCT CGGTGTTGAC CCATCTGGCA GTCGGCACGT CACTGGCAAC CATCGTATTC ACTTCGATCA ACGCTGTGCT CGAGCACCAC CGCAAGGGTG CCGTGCAATG GCCGATTTTC GCCTGGATGA CCCTCGGCAT CCTGCTGGGG GCCGGCGTCG GTGCCAAGAC CGCCTCGTTG ATCCAAGGCC CGTTGCTGCA AAAGATCATC GGTGTGTTTG CCCTGGTCAT CGCCGCGCAG ATGGCACTGG GCCTCAAACC CAAGGCCAGC CGTGGCATCC CCGGTAAACC TGCATTGGTT GGGGCCGGTG GGGTGATCGG CTGGGCTTCG GCCATCTTCG GCATCGGCGG TGGTTCGCTG ACCGTGCCGT TCCTGACCTG GCGCAGCCTG CCGATGCAGC AGGCGGTGGC CACGTCCTCG GCCTGTGGCC TGCCGATCGC CCTGGCCAGT GCCCTGAGCT TCATGCTGCT GGGTTGGCAC GAAGAGCACC TGCCGGCCCA TAGCCTGGGT TACGTGTACC TGCCGGCGAT GATCGGCATT GCCGTGACCA GCATGTTTTT CGCCCGCTTT GGCGCGCGTC TGGCGCACAA GCTGTCGCCC CGTTTGTTGA AACGCCTGTT CGCAGCGCTG CTGTTCTGTG TCGGCCTCAG CTTTTTGATT TGA
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Protein sequence | MEFVLYLLLG ACAGVLAGLF GVGGGIIIVP VLVFSFTLQG FDASVLTHLA VGTSLATIVF TSINAVLEHH RKGAVQWPIF AWMTLGILLG AGVGAKTASL IQGPLLQKII GVFALVIAAQ MALGLKPKAS RGIPGKPALV GAGGVIGWAS AIFGIGGGSL TVPFLTWRSL PMQQAVATSS ACGLPIALAS ALSFMLLGWH EEHLPAHSLG YVYLPAMIGI AVTSMFFARF GARLAHKLSP RLLKRLFAAL LFCVGLSFLI
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