| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5183 |
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| Symbol | |
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| ID | 5872997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5795270 |
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| End bp | 5796661 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641550319 |
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| Product | sodium:dicarboxylate symporter |
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| Protein accession | YP_001671401 |
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| Protein GI | 167036170 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.337682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC CGCTGTCTCT TAACCTGCTG GCGTTCCTGG CCCTGTTGCT GGGCCTGGCA
CAAACCCGCC GCACCGACTG GAGCCTGGCC AAGAAAGTAC TGCTGGGCCT GGTGCTGGGC
GTAGTCTTCG GCCTCGTGTT GCACACGATC TATGGCGCGG GCCACCCCGT GCTCAAGGCC
ACCATCGCCT GGCTTGACCT GGTCGGCAAC GGCTACGTCG GCCTGCTGCA GATGATCGTC
ATGCCGCTGA TCTTCGCCTC GATCCTAAGC GCCGTGGCAC GCCTGCACAA TGCCTCTTCG
CTGGGCCGCA TCAGCGTGCT GAGCATCGGC ACCCTGCTGC TGACCACCGC CATTGCCGCG
CTGATCGGCA TCGTGCTGAC CAACCTGTTC GGCCTCAGCG CCGAGGGCCT GGTGGCCGGT
GCCCAGGAAA GCGCACGCAT GCAAGTTATC CACAGCGACT ATGCCGGCAA GGTCGCCGAC
CTCAACATCC CGCAACTGCT GCTGTCGTTC ATCCCCAGCA ACCCGGTGGG TGACCTGGCG
CGTGCAAAGC CGACTTCGAT CATCAGCGTG GTAATCTTCG CCGTGTTCAT CGGCCTGGCG
GCGCTACAAC TGATCAAGGA AGATGCCGAG AAGGGCGAAC GCGCGCTGTC GGCCATCGAT
ACCCTGCAGG CCTGGGTGAT GCGCCTGGTG CGGGTGGTGA TGAAGCTGAC CCCGTATGGC
GTGCTGGCGT TGATGACCAA GGTGGTGGCC AGCTCCAACA TGGAAGACAT CCTCAAGCTG
GGCAGCTTCG TGGTGGTGTC GTACCTAGGC CTGGCGCTGA TGTTCGTGGT ACACGGCATC
ATCCTCGCCG CCACTGGCGT GAGCCCACTG CGCTTCTTCC GCAAGGTGTG GCCAGTACTG
ACCTTCGCCT TTACCAGCCG CTCCAGCGCC GCCAGCATTC CGCTGAACAT CGAAGCGCAA
ACCCGCCGCC TGGGTGTGCC GCAGTCGATC GCCAGCTTCA GCGCATCGTT CGGCACCACC
ATTGGCCAGA ACGGCTGCGC CGGCCTCTAT CCCGCAATGC TGGCGGTGAT GGTGGCGCCA
GCGGTGGGCA TCGATACCTT CGACCCGCTG TGGATCGCTA CTCTGGTAGC CATTGTCACG
TTGAGTTCGG CTGGGGTTGC TGGCGTGGGC GGCGGTGCCA CCTTTGCCGC GCTGATCGTA
CTACCGGCCA TGGGCTTGCC GGTGGAATTG GTGGCGTTGC TGATTTCGGT GGAGCCGCTG
ATCGACATGG GGCGTACGGC GTTGAACGTG AATGGTTCGA TGACGGCCGG CGTGGTGACC
AGCCAGCTGT TGAAAGAGAC CGACAAGGAT GTGCTGGCGG GCGATGAGCA TGCCGAACTG
AGCCATACCT GA
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| Protein sequence | MNLPLSLNLL AFLALLLGLA QTRRTDWSLA KKVLLGLVLG VVFGLVLHTI YGAGHPVLKA
TIAWLDLVGN GYVGLLQMIV MPLIFASILS AVARLHNASS LGRISVLSIG TLLLTTAIAA
LIGIVLTNLF GLSAEGLVAG AQESARMQVI HSDYAGKVAD LNIPQLLLSF IPSNPVGDLA
RAKPTSIISV VIFAVFIGLA ALQLIKEDAE KGERALSAID TLQAWVMRLV RVVMKLTPYG
VLALMTKVVA SSNMEDILKL GSFVVVSYLG LALMFVVHGI ILAATGVSPL RFFRKVWPVL
TFAFTSRSSA ASIPLNIEAQ TRRLGVPQSI ASFSASFGTT IGQNGCAGLY PAMLAVMVAP
AVGIDTFDPL WIATLVAIVT LSSAGVAGVG GGATFAALIV LPAMGLPVEL VALLISVEPL
IDMGRTALNV NGSMTAGVVT SQLLKETDKD VLAGDEHAEL SHT
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