| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5178 |
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| Symbol | |
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| ID | 5872993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5790294 |
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| End bp | 5792135 |
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| Gene Length | 1842 bp |
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| Protein Length | 613 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550316 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001671398 |
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| Protein GI | 167036167 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATT ATCGTTCCAA GACTTCCACC CAAGGCCGCA ACATGGCCGG CGCCCGTGCC
CTGTGGCGCG CCACCGGGAT GAAGGACGAA GACTTCAAGA AACCGATCAT CGCCATCGCC
AACTCGTTCA CCCAGTTCGT CCCGGGCCAC GTGCACCTGA AGGACCTGGG CCAGCTGGTT
GCCCGCGAAA TCGAACGCGC CGGTGGCGTG GCCAAGGAAT TCAACACCAT CGCGGTCGAT
GACGGCATCG CCATGGGCCA CGACGGCATG CTGTACTCGC TGCCAAGCCG CGAGATCATT
GCCGACGCCG TGGAATACAT GGTCAACGCC CACTGCGCCG ACGCCATCGT CTGTATCTCC
AACTGCGACA AGATCACCCC CGGCATGCTG ATGGCCGCCC TGCGCCTGAA CATCCCGGTG
ATCTTCGTGT CCGGTGGCCC GATGGAAGCC GGCAAGACCA AGCTGGCCAG CCACGGCCTG
GACCTGGTCG ATGCCATGGT GATCGCTGCC GACTCCTCGG CTTCCGATGA AAAAGTCGCC
GAATACGAGC GCAGCGCCTG CCCGACCTGC GGTTCGTGCT CCGGCATGTT CACCGCCAAC
TCGATGAACT GCCTGACCGA AGCCCTGGGC CTGGCCCTGC CGGGCAACGG CTCGACCCTG
GCCACCCACG CCGACCGCGA GCAGCTGTTC CTCACCGCCG GCCGCACCAT CGTCGAGCTG
TGCAAACGCT ACTACGGCGA GAACGACGAG TCGGTACTGC CACGCAGCAT CGCCAACTTC
AAGGCGTTCG AAAACGCCAT GATGCTCGAC ATCGCCATGG GCGGTTCGAC CAACACCATC
CTGCACCTGC TGGCCGCAGC CCAGGAAGGC GAAGTCGAAT TCGATCTGCG TGACATCGAT
CGCCTGTCGC GCAAAGTGCC GCAGCTGTGC AAAGTGGCGC CGAACATCCA GAAGTACCAC
ATGGAAGACG TGCACCGCGC CGGCGGCATC TTCAGCATCC TCGGTTCGCT GGCCCGTGGC
GGCCTGCTGC ACACCGACCT GCCGACCGTG CACAGCCGCA GCATGGAAGA AGCCATCGCC
AAATGGGACA TCACCCAGAC CGATGACGAA GCCGTGCACA CCTTCTTCAA GGCCGGCCCT
GCCGGTATCC CGACGCAGAC CGCGTTCAGC CAGTCGACCC GTTGGGAAAC CCTCGACGAC
GACCGTGAAA ACGGCTGCAT CCGCAGCTTC GAGCACGCCT ACTCGCAAGA GGGCGGCCTG
GCCGTGCTGT ACGGCAACAT CGCCCTGGAT GGCTGCGTGG TGAAAACCGC TGGCGTAGAC
GAATCGATCC ACGTATTCGA AGGCAATGCC AAAATCTTCG AGAGCCAGGA CAGCGCGGTG
CGCGGCATTC TTGCCGACGA GGTGAAGGCG GGCGACATCG TGATCATCCG CTACGAAGGC
CCGAAAGGCG GCCCAGGCAT GCAGGAAATG CTGTACCCGA CCTCGTACCT GAAGTCCAAA
GGCCTGGGCA AGGCTTGCGC CCTGCTCACC GACGGCCGCT TCTCGGGCGG CACCTCGGGC
CTGTCGATCG GCCACGCCTC GCCGGAAGCC GCTGCTGGCG GCGCCATCGG CCTGGTGCGC
GACGGCGACA AGGTGTTGAT CGACATCCCC AACCGTTCGA TCAACCTGCT GGTCAGCGAT
GAAGAACTGG CCGAGCGCCG CGTCGAACAG GACAAGAAGG GCTGGAAGCC TGCGGAAGTA
CGCCCACGCA AGGTGACCAC CGCGCTGAAG GCCTATGCCC TGCTGGCGAC CAGTGCCGAC
AAGGGTGCTG TGCGTAACAA GGCGATGCTG GAAGGGCTCT GA
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| Protein sequence | MPDYRSKTST QGRNMAGARA LWRATGMKDE DFKKPIIAIA NSFTQFVPGH VHLKDLGQLV
AREIERAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREII ADAVEYMVNA HCADAIVCIS
NCDKITPGML MAALRLNIPV IFVSGGPMEA GKTKLASHGL DLVDAMVIAA DSSASDEKVA
EYERSACPTC GSCSGMFTAN SMNCLTEALG LALPGNGSTL ATHADREQLF LTAGRTIVEL
CKRYYGENDE SVLPRSIANF KAFENAMMLD IAMGGSTNTI LHLLAAAQEG EVEFDLRDID
RLSRKVPQLC KVAPNIQKYH MEDVHRAGGI FSILGSLARG GLLHTDLPTV HSRSMEEAIA
KWDITQTDDE AVHTFFKAGP AGIPTQTAFS QSTRWETLDD DRENGCIRSF EHAYSQEGGL
AVLYGNIALD GCVVKTAGVD ESIHVFEGNA KIFESQDSAV RGILADEVKA GDIVIIRYEG
PKGGPGMQEM LYPTSYLKSK GLGKACALLT DGRFSGGTSG LSIGHASPEA AAGGAIGLVR
DGDKVLIDIP NRSINLLVSD EELAERRVEQ DKKGWKPAEV RPRKVTTALK AYALLATSAD
KGAVRNKAML EGL
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